Treponema pallidum complete genome - 0..1138011 1031 proteins Location Strand Length PID Gene Synonym Code COG Product 4..1398 + 464 3322256 TP0001 - L COG0593 chromosomal replication initiator protein (dnaA) 1641..2756 + 371 3322257 TP0002 - L COG0592 DNA polymerase III, subunit beta (dnaN) 2623..3834 + 403 3322258 TP0003 - L COG1195 recF protein (recF) 3827..4264 + 145 3322262 TP0004 - - - T. pallidum predicted coding region TP0004 4391..6832 + 813 3322255 TP0005 - L COG0188 DNA gyrase, subunit A (gyrA) 7014..7181 + 55 3322259 TP0006 - - - Tp75 protein 7317..7967 + 216 3322260 TP0007 - - - T. pallidum predicted coding region TP0007 7991..8260 + 89 3322261 TP0008 - - - T. pallidum predicted coding region TP0008 10237..10362 + 41 3322269 TP0010 - - - T. pallidum predicted coding region TP0010 10396..12378 + 660 3322264 TP0011 - - - tpr protein B (tprB) 12372..12548 + 58 3322270 TP0012 - - - T. pallidum predicted coding region TP0012 12545..13210 + 221 3322271 TP0013 - - - T. pallidum predicted coding region TP0013 13167..13775 + 202 3322272 TP0014 - - - T. pallidum predicted coding region TP0014 13966..15780 + 604 3322265 TP0015 - J COG0072 phenylalanyl-tRNA synthetase beta subunit (pheT) 15743..18316 + 857 3322266 TP0016 - O COG1067 ATP-dependent protease LA (lon-1) 18404..19351 + 315 3322267 TP0017 - R COG0457 conserved hypothetical protein 19418..21391 + 657 3322268 TP0018 - S COG1747 transcription elongation factor 21558..22046 + 162 3322274 TP0019 - K COG0782 transcription elongation factor (greA) 22046..24169 + 707 3322275 TP0020 - - - 76K protein 25107..25373 + 88 3322280 TP0021 - - - T. pallidum predicted coding region TP0021 25328..27496 + 722 3322281 TP0022 - - - T. pallidum predicted coding region TP0022 27557..28888 + 443 3322276 TP0023 - R COG0733 sodium- and chloride- dependent transporter 29068..29778 + 236 3322277 TP0024 - P COG0569 conserved hypothetical protein 29857..32928 - 1023 3322278 TP0025 - R COG1026 conserved hypothetical protein 32957..33979 - 340 3322279 TP0026 - N COG1536 flagellar motor switch protein (fliG-1) 34205..35428 + 407 3322283 TP0027 - R COG1253 hemolysin, putative 35442..36803 + 453 3322284 TP0028 - R COG1253 hemolysin, putative 36911..38188 + 425 3322285 TP0029 - M COG0766 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (murA) 38307..39941 + 544 3322286 TP0030 - O COG0459 heat shock protein (groEL) 40005..40283 + 92 3322292 TP0031 - - - T. pallidum predicted coding region TP0031 40280..41080 - 266 3322287 TP0032 - S COG1385 conserved hypothetical protein 41077..41688 - 203 3322288 TP0033 - - - conserved hypothetical integral membrane protein 41789..42739 - 316 3322289 TP0034 - P COG0803 ABC transporter, periplasmic binding protein 42937..43653 + 238 3322290 TP0035 - P COG1121 ABC transporter, ATP-binding protein 43653..44453 + 266 3322291 TP0036 - P COG1108 ABC transporter, permease protein 44562..45557 - 331 3322294 TP0037 - C COG1052 D-specific D-2-hydroxyacid dehydrogenase 45654..46706 - 350 3322295 TP0038 - - - regulatory protein (pfoS/R) 46755..46913 + 52 3322301 TP0039 - - - T. pallidum predicted coding region TP0039 47591..49384 + 597 3322296 TP0040 - N COG0840 methyl-accepting chemotaxis protein (mcp1) 49386..49508 + 40 3322302 TP0041 - - - T. pallidum predicted coding region TP0041 49505..50437 + 310 3322297 TP0042 - S COG1652 hypothetical protein 50418..52550 + 710 3322298 TP0043 - M COG0741 soluble lytic transglycosylase, putative 52590..54482 + 630 3322299 TP0044 - D COG0445 glucose inhibited division protein A (gidA) 54538..55437 - 299 3322300 TP0045 - F COG1816 adenosine deaminase, putative 55799..56500 - 233 3322304 TP0046 - S COG1774 hypothetical protein 56518..57039 - 173 3322305 TP0047 - S COG1728 conserved hypothetical protein 57045..57476 - 143 3322306 TP0048 - S COG1664 conserved hypothetical protein 57498..58526 - 342 3322307 TP0049 - M COG0739 conserved hypothetical protein 58819..59427 - 202 3322308 TP0050 - R COG2236 conserved hypothetical protein 59578..60633 + 351 3322309 TP0051 - J COG0216 peptide chain release factor 1 (prfA) 60603..61649 + 348 3322310 TP0052 - J COG2890 protoporphyrinogen oxidase (hemK) 61738..62793 - 351 3322311 TP0053 - F COG0208 ribonucleoside-diphosphate reductase, subunit beta (nrdB) 62964..63923 + 319 3322312 TP0054 - J COG0566 conserved hypothetical protein 64130..64366 + 78 3322315 TP0055 - C COG3630 T. pallidum predicted coding region TP0055 64363..66144 + 593 3322313 TP0056 - C COG3632 oxaloacetate decarboxylase, subunit alpha (oadA) 66156..67565 + 469 3322314 TP0057 - C COG1883 oxaloacetate decarboxylase, subunit beta (oadB) 67640..68956 - 438 3322317 TP0058 - L COG0305 replicative DNA helicase (dnaB) 68940..69167 - 75 3322326 TP0059 - - - T. pallidum predicted coding region TP0059 69173..69643 - 156 3322318 TP0060 - J COG0359 ribosomal protein L9 (rplI) 69749..70048 - 99 3322319 TP0061 - J COG0238 ribosomal protein S18 (rpsR) 70165..70695 - 176 3322320 TP0062 - L COG0629 single-strand DNA binding protein (ssb) 70704..70985 - 93 3322321 TP0063 - J COG0360 ribosomal protein S6 (rpsF) 71127..71702 + 191 3322327 TP0064 - - - T. pallidum predicted coding region TP0064 71776..72363 + 195 3322322 TP0065 - L COG0742 conserved hypothetical protein 72347..72661 + 104 3322328 TP0066 - - - T. pallidum predicted coding region TP0066 72649..73830 + 393 3322323 TP0067 - R COG0457 conserved hypothetical protein 74011..75033 + 340 3322324 TP0068 - R COG0820 conserved hypothetical protein 75089..75619 - 176 3322329 TP0069 - - - T. pallidum predicted coding region TP0069 75469..75855 - 128 3322330 TP0070 - - - T. pallidum predicted coding region TP0070 75906..78542 - 878 3322325 TP0071 - O COG0542 ATP-dependent Clp protease subunit B (clpB) 78746..79018 + 90 3322332 TP0072 - O COG0695 conserved hypothetical protein 79088..80629 - 513 3322342 TP0073 - S COG1639 T. pallidum predicted coding region TP0073 80934..82343 + 469 3322333 TP0074 - G COG1653 sugar ABC transporter, periplasmic binding protein (y4oP) 82462..83352 + 296 3322334 TP0075 - G COG1175 sugar ABC transporter, permease protein (y4oQ) 83392..84213 + 273 3322335 TP0076 - G COG0395 sugar ABC transporter, permease protein (y4oR) 84254..85870 + 538 3322336 TP0077 - M COG1086 capsular polysaccharide biosynthesis protein (cap5D) 85875..87113 + 412 3322337 TP0078 - M COG0399 spore coat polysaccharide biosynthesis protein (spsC) 87041..89263 + 740 3322338 TP0079 - C COG1529 conserved hypothetical protein 89260..89727 + 155 3322339 TP0080 - C COG2080 quinoline 2-oxidoreductase 89734..90582 + 282 3322340 TP0081 - C COG1319 conserved hypothetical protein 90629..92431 - 600 3322341 TP0082 - T COG3604 formate hydrogenlyase transcriptional activator (fhlA) 93177..94457 + 426 3322344 TP0083 - S COG1306 conserved hypothetical protein 94437..94670 - 77 3322353 TP0084 - - - T. pallidum predicted coding region TP0084 94784..95230 - 148 3322345 TP0085 - G COG1762 PTS system, nitrogen regulatory IIA component (ptsN-1) 95311..96255 + 314 3322346 TP0086 - - - conserved hypothetical protein 96258..96797 - 179 3322347 TP0087 - S COG1430 conserved hypothetical protein 96781..97395 - 204 3322348 TP0088 - - - conserved hypothetical protein 97425..98660 - 411 3322349 TP0089 - T COG0664 cyclic nucleotide binding protein 98743..99807 - 354 3322351 TP0090 - M COG0812 UDP-N-acetylmuramate dehydrogenase (murB) 99989..101551 + 520 3322350 TP0091 - J COG0215 cysteinyl-tRNA synthetase (cysS) 101622..102110 + 162 3322352 TP0092 - K COG1595 RNA polymerase sigma-24 factor (rpoE) 102094..102741 + 215 3322354 TP0093 - - - T. pallidum predicted coding region TP0093 102879..103889 + 336 3322356 TP0094 - C COG0280 phosphate acetyltransferase (pta) 103889..105835 + 648 3322365 TP0095 - R COG0457 T. pallidum predicted coding region TP0095 105909..106271 - 120 3322357 TP0096 - T COG1734 dnaK suppressor, putative 106441..106659 + 72 3322358 TP0097 - J COG0361 translation initiation factor 1 (infA) 106719..107369 - 216 3322359 TP0098 - O COG0484 heat-shock protein, putative 107373..108128 - 251 3322360 TP0099 - F COG0528 uridylate kinase (smbA) 108323..108925 + 200 3322361 TP0100 - O COG0526 thioredoxin, putative 108918..109712 + 264 3322362 TP0101 - O COG0785 cytochrome c biogenesis protein (ccdA) 109750..111723 - 657 3322363 TP0102 - L COG0210 rep helicase, single-stranded DNA-dependent ATPase (rep) 111788..113611 + 607 3322364 TP0103 - L COG0514 ATP-dependent DNA helicase, putative 113858..115639 + 593 3322367 TP0104 - F COG0737 5'-nucleotidase (ushA) 115806..118799 + 997 3322368 TP0105 - L COG0749 DNA polymerase I (polA) 118831..120363 - 510 3322369 TP0106 - M COG1292 carnitine transporter, putative 120344..121921 - 525 3322370 TP0107 - M COG1208 licC protein (licC) 122275..123660 - 461 3322371 TP0108 - G COG0205 pyrophosphate--fructose 6-phosphate 1-phosphotransferase (pfk) 123762..124640 - 292 3322373 TP0109 - J COG0566 rRNA methylase, putative 125181..126914 + 577 3322381 TP0110 - - - T. pallidum predicted coding region TP0110 126974..128401 + 475 3322374 TP0111 - K COG1508 RNA polymerase sigma-54 factor (rpoN) 128398..129750 - 450 3322376 TP0112 - E COG3579 aminopeptidase C (pepC) 129892..130878 + 328 3322375 TP0113 - O COG0330 Lambda CII stability-governing protein (hflK) 130883..131878 + 331 3322377 TP0114 - O COG0330 Lambda CII stability-governing protein (hflC) 131903..132712 - 269 3322378 TP0115 - H COG0351 phosphomethypyrimidine kinase (thiD) 132863..134869 + 668 3322379 TP0116 - L COG0556 excinuclease ABC, subunit B (uvrB) 134901..136697 - 598 3322380 TP0117 - - - tpr protein C (tprC) 136777..138042 - 421 3322388 TP0118 - - - T. pallidum predicted coding region TP0118 138140..138799 - 219 3322383 TP0119 - R COG2011 amino acid ABC transporter, permease protein (yaeE) 138799..139608 - 269 3322384 TP0120 - R COG1135 amino acid ABC transporter, ATP-binding protein (abc) 139738..140805 + 355 3322385 TP0121 - E COG1509 conserved hypothetical protein 141025..142881 - 618 3322386 TP0122 - C COG1274 phosphoenolpyruvate carboxykinase (pckA) 142987..145557 + 856 3322389 TP0123 - - - T. pallidum predicted coding region TP0123 145571..146677 + 368 3322387 TP0124 - R COG0012 conserved hypothetical GTP-binding protein 146754..147548 + 264 3322391 TP0125 - L COG0708 exodeoxyribonuclease (exoA) 147612..148487 - 291 3322393 TP0126 - - - T. pallidum predicted coding region TP0126 148595..149284 + 229 3322394 TP0127 - - - T. pallidum predicted coding region TP0127 149473..149820 + 115 3322395 TP0128 - - - T. pallidum predicted coding region TP0128 149805..150281 + 158 3322396 TP0129 - - - T. pallidum predicted coding region TP0129 150610..151029 - 139 3322397 TP0130 - - - T. pallidum predicted coding region TP0130 151101..152897 - 598 3322392 TP0131 - - - tpr protein D (tprD) 152942..153151 - 69 3322398 TP0132 - - - T. pallidum predicted coding region TP0132 153136..154368 - 410 3322399 TP0133 - - - T. pallidum predicted coding region TP0133 154365..155495 - 376 3322400 TP0134 - - - T. pallidum predicted coding region TP0134 155447..156388 - 313 3322401 TP0135 - - - T. pallidum predicted coding region TP0135 156792..158279 + 495 3322413 TP0136 - - - T. pallidum predicted coding region TP0136 158258..158395 + 45 3322414 TP0137 - - - T. pallidum predicted coding region TP0137 158533..159270 - 245 3322415 TP0138 - - - T. pallidum predicted coding region TP0138 159278..159970 - 230 3322403 TP0139 - P COG0569 conserved hypothetical protein 160010..161737 - 575 3322404 TP0140 - P COG0168 K+ transport protein (ntpJ) 161909..162442 + 177 3322405 TP0141 - L COG0350 methylated-DNA-protein-cysteine S-methyltransferase (dat) 162393..163055 - 220 3322406 TP0142 - G COG1130 thiamine ABC transporter, ATP-binding protein, putative 163048..164829 - 593 3322407 TP0143 - H COG1178 thiamine ABC transporter, permease protein, putative 164787..165794 - 335 3322409 TP0144 - H COG1840 thiamine ABC transporter, thiamine-binding periplasmic protein, putative 165904..167874 + 656 3322408 TP0145 - I COG1022 long-chain-fatty-acid--CoA ligase 169279..171138 - 619 3322410 TP0147 - G COG1449 alpha-amylase 1, putative 171135..171713 - 192 3322416 TP0148 - - - T. pallidum predicted coding region TP0148 171707..172300 - 197 3322417 TP0149 - - - T. pallidum predicted coding region TP0149 172293..172760 - 155 3322418 TP0150 - - - T. pallidum predicted coding region TP0150 172744..173763 - 339 3322411 TP0151 - C COG1805 conserved hypothetical integral membrane protein 173750..175294 - 514 3322412 TP0152 - C COG1726 nitrogen fixation protein (rnfC) 175370..175861 - 163 3322420 TP0153 - S COG1963 conserved hypothetical protein 176086..177123 + 345 3322421 TP0154 - J COG0564 conserved hypothetical protein 177129..178244 + 371 3322422 TP0155 - M COG0739 conserved hypothetical protein 178285..178689 - 134 3322423 TP0156 - R COG0824 conserved hypothetical protein 178686..179588 - 300 3322424 TP0157 - - - conserved hypothetical protein 179585..180271 - 228 3322425 TP0158 - R COG1011 conserved hypothetical protein 180275..181303 - 342 3322429 TP0159 - - - T. pallidum predicted coding region TP0159 181419..183272 - 617 3322426 TP0160 - J COG0442 prolyl-tRNA synthetase (proS) 183275..183367 - 30 3322430 TP0161 - - - T. pallidum predicted coding region TP0161 183384..184436 - 350 3322427 TP0162 - L COG2255 Holliday junction DNA helicase (ruvB) 184611..185537 + 308 3322428 TP0163 - P COG0803 ABC transporter, periplasmic binding protein (troA) 185685..186485 + 266 3322432 TP0164 - P COG1121 ABC transporter, ATP-binding protein (troB) 186457..187353 + 298 3322433 TP0165 - P COG1108 ABC transporter, permease protein (troC) 187357..188460 + 367 3322434 TP0166 - P COG1108 ABC transporter, permease protein (troD) 188470..188931 + 153 3322435 TP0167 - K COG1321 cation-activated repressor protein (troR) 189011..189766 + 251 3322436 TP0168 - G COG0588 phosphoglycerate mutase (pgm) 189990..190088 + 32 3322439 TP0169 - - - T. pallidum predicted coding region TP0169 190085..190894 + 269 3322437 TP0170 - F COG0775 pfs protein (pfs) 190994..191422 + 142 3322438 TP0171 - - - lipoprotein, 15 kDa (tpp15) 191570..192097 - 175 3322440 TP0172 - T COG2199 T. pallidum predicted coding region TP0172 192132..192815 - 227 3322441 TP0173 - - - T. pallidum predicted coding region TP0173 192784..193626 - 280 3322442 TP0174 - - - T. pallidum predicted coding region TP0174 193376..194008 - 210 3322443 TP0175 - S COG2604 T. pallidum predicted coding region TP0175 194039..194305 - 88 3322444 TP0176 - - - T. pallidum predicted coding region TP0176 194302..195612 - 436 3322445 TP0177 - - - T. pallidum predicted coding region TP0177 195706..196632 - 308 3322471 TP0178 - - - T. pallidum predicted coding region TP0178 196632..198515 - 627 3322472 TP0179 - - - T. pallidum predicted coding region TP0179 198457..198615 - 52 3322474 TP0180 - - - T. pallidum predicted coding region TP0180 198608..199051 + 147 3322473 TP0181 - O COG2919 T. pallidum predicted coding region TP0181 198891..199670 + 259 3322447 TP0182 - J COG0009 conserved hypothetical protein 199673..200518 - 281 3322475 TP0183 - - - T. pallidum predicted coding region TP0183 200523..200927 - 134 3322448 TP0184 - O COG0691 small protein (smpB) 201075..201782 + 235 3322449 TP0185 - N COG0681 signal peptidase I (sip) 201837..203018 + 393 3322450 TP0186 - H COG0635 oxygen-independent coproporphyrinogen III oxidase, putative 203082..204569 + 495 3322451 TP0187 - J COG0050 translation elongation factor TU (tuf) 204641..204949 + 102 3322452 TP0188 - J COG0051 ribosomal protein S10 (rpsJ) 204996..205622 + 208 3322453 TP0189 - J COG0087 ribosomal protein L3 (rplC) 205636..206286 + 216 3322454 TP0190 - J COG0088 ribosomal protein L4 (rplD) 206273..206557 + 94 3322455 TP0191 - J COG0089 ribosomal protein L23 (rplW) 206613..207434 + 273 3322456 TP0192 - J COG0090 ribosomal protein L2 (rplB) 207444..207731 + 95 3322457 TP0193 - J COG0185 ribosomal protein S19 (rpsS) 207740..208114 + 124 3322458 TP0194 - J COG0091 ribosomal protein L22 (rplV) 208098..208841 + 247 3322459 TP0195 - J COG0092 ribosomal protein S3 (rpsC) 208845..209264 + 139 3322460 TP0196 - J COG0197 ribosomal protein L16 (rplP) 209279..209497 + 72 3322461 TP0197 - J COG0255 ribosomal protein L29 (rpmC) 209512..209766 + 84 3322462 TP0198 - J COG0186 ribosomal protein S17 (rpsQ) 209779..210147 + 122 3322463 TP0199 - J COG0093 ribosomal protein L14 (rplN) 210159..210470 + 103 3322464 TP0200 - J COG0198 ribosomal protein L24 (rplX) 210467..211024 + 185 3322465 TP0201 - J COG0094 ribosomal protein L5 (rplE) 211036..211221 + 61 3322470 TP0202 - J COG0199 ribosomal protein S14 (rpsN) 211237..211635 + 132 3322466 TP0203 - J COG0096 ribosomal protein S8 (rpsH) 211645..212184 + 179 3322467 TP0204 - J COG0097 ribosomal protein L6 (rplF) 212193..212555 + 120 3322468 TP0205 - J COG0256 ribosomal protein L18 (rplR) 212564..213082 + 172 3322469 TP0206 - J COG0098 ribosomal protein S5 (rpsE) 213270..213731 + 153 3322477 TP0207 - J COG0200 ribosomal protein L15 (rplO) 213739..215091 + 450 3322478 TP0208 - N COG0201 preprotein translocase subunit (secY) 215096..215209 + 37 3322489 TP0209 - J COG0257 ribosomal protein L36 (rpmJ-1) 215225..215590 + 121 3322479 TP0210 - J COG0099 ribosomal protein S13 (rpsM) 215608..215988 + 126 3322480 TP0211 - J COG0100 ribosomal protein S11 (rpsK) 216003..217058 + 351 3322481 TP0212 - K COG0202 DNA-directed RNA polymerase, alpha subunit (rpoA) 217048..217542 + 164 3322482 TP0213 - J COG0203 ribosomal protein L17 (rplQ) 217566..217763 + 65 3322490 TP0214 - - - T. pallidum predicted coding region TP0214 217969..218631 + 220 3322483 TP0215 - O COG0576 grpE protein (grpE) 218747..220654 + 635 3322484 TP0216 - O COG0443 heat shock protein 70 (dnaK) 222201..223670 + 489 3322485 TP0218 - T COG2208 sigma factor SigB regulation protein, putative 223674..225821 + 715 3322486 TP0219 - T COG2208 sigma factor SigG regulation protein, putative 225850..226176 + 108 3322487 TP0220 - T COG1366 anti-sigma F factor antagonist (spoIIAA-1) 226177..226959 + 260 3322488 TP0221 - M COG1876 D,D-carboxypeptidase, putative 226969..227415 + 148 3322491 TP0222 - - - T. pallidum predicted coding region TP0222 227683..228990 + 435 3322493 TP0223 - E COG0436 aspartate aminotransferase (tpaaT) 229027..229131 + 34 3322499 TP0224 - - - T. pallidum predicted coding region TP0224 229177..229917 + 246 3322494 TP0225 - - - leucine-rich repeat protein TpLRR 235069..235755 - 228 3322500 TP0226 - - - T. pallidum predicted coding region TP0226 235808..236575 - 255 3322495 TP0227 - P COG1122 cobalt ABC transporter, ATP-binding protein 236642..237457 - 271 3322497 TP0228 - R COG1268 biotin synthase, putative 237401..238234 + 277 3322496 TP0229 - L COG1573 DNA polymerase, bacteriophage-type 238239..240212 + 657 3322498 TP0230 - L COG1198 primosomal protein N (priA) 240313..240963 + 216 3322502 TP0231 - J COG0564 conserved hypothetical protein 241063..241179 + 38 3322513 TP0232 - - - T. pallidum predicted coding region TP0232 241210..241755 + 181 3322503 TP0233 - T COG1366 anti-sigma F factor antagonist, putative 241990..242160 + 56 3322504 TP0234 - J COG0267 ribosomal protein L33 (rpmG) 242310..242489 + 59 3322505 TP0235 - N COG0690 preprotein translocase subunit (secE) 242499..243056 + 185 3322506 TP0236 - K COG0250 transcription antitermination protein (nusG) 243163..243603 + 146 3322507 TP0237 - J COG0080 ribosomal protein L11 (rplK) 243600..244280 + 226 3322508 TP0238 - J COG0081 ribosomal protein L1 (rplA) 244282..244824 + 180 3322509 TP0239 - J COG0244 ribosomal protein L10 (rplJ) 244933..245322 + 129 3322510 TP0240 - J COG0222 ribosomal protein L7/L12 (rplL) 245585..249121 + 1178 3322511 TP0241 - K COG0085 DNA-directed RNA polymerase, beta subunit (rpoB) 249134..253384 + 1416 3322512 TP0242 - K COG0086 DNA-directed RNA polymerase, beta' subunit 253487..253861 + 124 3322515 TP0243 - J COG0048 ribosomal protein S12 (rpsL) 253883..254353 + 156 3322516 TP0244 - J COG0049 ribosomal protein S7 254377..257832 + 1151 3322522 TP0245 - - - T. pallidum predicted coding region TP0245 257978..259771 + 597 3322523 TP0246 - - - T. pallidum predicted coding region TP0246 259822..260895 + 357 3322517 TP0247 - M COG0860 N-acetylmuramoyl-L-alanine amidase (amiA) 260962..261366 + 134 3322524 TP0248 - - - T. pallidum predicted coding region TP0248 261445..262497 + 350 3322518 TP0249 - - - flagellar filament outer layer protein (flaA-1) 262548..262775 + 75 3322525 TP0250 - - - T. pallidum predicted coding region TP0250 262929..263246 + 105 3322519 TP0251 - L COG0776 DNA-binding protein II 263236..264876 + 546 3322520 TP0252 - M COG0815 apolipoprotein N-acyltransferase, putative 264867..265280 + 137 3322521 TP0253 - S COG1664 conserved hypothetical protein 265517..267076 + 519 3322527 TP0254 - K COG1158 transcription termination factor Rho (rho) 267195..267398 + 67 3322528 TP0255 - J COG0254 ribosomal protein L31 (rpmE) 267443..268093 + 216 3322529 TP0256 - I COG0558 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (pgsA) 268190..269260 + 356 3322530 TP0257 - C COG0584 glycerophosphoryldiester phosphodiesterase (glpQ) 269326..270036 - 236 3322531 TP0258 - - - conserved hypothetical protein 270115..270726 + 203 3322536 TP0259 - - - T. pallidum predicted coding region TP0259 270857..272203 - 448 3322537 TP0260 - - - T. pallidum predicted coding region TP0260 272318..273361 + 347 3322532 TP0261 - T COG0664 catabolite gene activator, putative 273339..274013 + 224 3322533 TP0262 - T COG0664 catabolite gene activator (crp) 274028..275812 + 594 3322534 TP0263 - - - conserved hypothetical protein 275817..276473 + 218 3322535 TP0264 - F COG0274 deoxyribose-phosphate aldolase (deoC) 276905..278272 - 455 3322539 TP0265 - E COG1114 amino acid ABC transporter, permease protein (braC) 278323..278448 + 41 3322546 TP0266 - - - T. pallidum predicted coding region TP0266 283557..283922 + 121 3322540 TP0267 - S COG1664 conserved hypothetical protein 283919..284572 + 217 3322541 TP0268 - R COG0457 conserved hypothetical protein 284582..286030 + 482 3322542 TP0269 - J COG0621 conserved hypothetical protein 286104..287540 + 478 3322543 TP0270 - J COG0617 polynucleotide adenylyltransferase (pcnA) 287537..288511 - 324 3322544 TP0271 - K COG1475 chromosome partitioning protein (parB) 288498..289259 - 253 3322545 TP0272 - D COG1192 SpoOJ regulator (soj) 289392..290183 + 263 3322561 TP0273 - - - T. pallidum predicted coding region TP0273 290221..290721 - 166 3322548 TP0274 - F COG2131 deoxycytidylate deaminase, putative 290810..291559 - 249 3322549 TP0275 - M COG1922 UDP-N-acetyl-D-mannosamine transferase, putative 291538..292422 - 294 3322550 TP0276 - S COG1385 conserved hypothetical protein 292595..293941 - 448 3322551 TP0277 - M COG0793 carboxyl-terminal protease (ctp) 294069..294197 + 42 3322562 TP0278 - - - T. pallidum predicted coding region TP0278 294243..296834 + 863 3322552 TP0279 - J COG0539 ribosomal protein S1 (rpsA) 296831..296959 + 42 3322563 TP0280 - - - T. pallidum predicted coding region TP0280 296976..297104 + 42 3322564 TP0281 - - - T. pallidum predicted coding region TP0281 297097..297816 + 239 3322565 TP0282 - - - T. pallidum predicted coding region TP0282 297994..298473 + 159 3322553 TP0283 - H COG0669 lipopolysaccharide core biosynthesis protein (kdtB) 298578..299237 + 219 3322566 TP0284 - - - T. pallidum predicted coding region TP0284 299177..300256 + 359 3322567 TP0285 - - - T. pallidum predicted coding region TP0285 300228..300593 + 121 3322554 TP0286 - - - conserved hypothetical protein 300560..301183 + 207 3322555 TP0287 - - - conserved hypothetical protein 301183..302130 + 315 3322556 TP0288 - M COG1861 spore coat polysaccharide biosynthesis protein (spsF) 302153..303757 + 534 3322568 TP0289 - Q COG0500 T. pallidum predicted coding region TP0289 303812..304645 + 277 3322557 TP0290 - R COG0561 conserved hypothetical protein 304682..305563 + 293 3322569 TP0291 - C COG1304 T. pallidum predicted coding region TP0291 305554..306807 + 417 3322558 TP0292 - M COG2885 outer membrane protein (tpn50) 306819..306995 + 58 3322570 TP0293 - - - T. pallidum predicted coding region TP0293 306973..308238 + 421 3322559 TP0294 - F COG0462 phosphoribosyl pyrophosphate synthetase (prs) 308257..309501 + 414 3322560 TP0295 - G COG1070 carhohydrate kinase (xylB) 309587..310222 + 211 3322572 TP0296 - F COG0237 conserved hypothetical protein 310186..310998 + 270 3322573 TP0297 - - - conserved hypothetical protein 311131..312162 + 343 3322574 TP0298 - N COG1744 exported protein (tpn38b) 312159..312383 + 74 3322580 TP0299 - - - T. pallidum predicted coding region TP0299 312368..313918 + 516 3322575 TP0300 - G COG1129 ribose/galactose ABC transporter, ATP-binding protein (rbsA-1) 313915..315048 + 377 3322576 TP0301 - R COG1079 conserved hypothetical integral membrane protein 315039..315980 + 313 3322577 TP0302 - R COG1079 conserved hypothetical integral membrane protein 315967..317913 - 648 3322578 TP0303 - L COG0323 DNA mismatch repair protein (mutL) 317926..321045 - 1039 3322581 TP0304 - - - T. pallidum predicted coding region TP0304 320972..322705 + 577 3322579 TP0305 - F COG0504 CTP synthase (pyrG) 322870..323484 + 204 3322583 TP0306 - J COG0522 ribosomal protein S4 323571..324599 + 342 3322584 TP0307 - S COG2815 conserved hypothetical protein 324574..325539 + 321 3322585 TP0308 - E COG0834 amino acid ABC transporter, periplasmic binding protein (hisJ) 325605..326423 + 272 3322586 TP0309 - E COG0834 amino acid ABC transporter, periplasmic binding protein 326392..326775 + 127 3322591 TP0310 - L COG0629 T. pallidum predicted coding region TP0310 326754..326897 - 47 3322592 TP0311 - - - T. pallidum predicted coding region TP0311 326881..327894 + 337 3322587 TP0312 - S COG2035 conserved hypothetical protein 327985..330273 + 762 3322588 TP0313 - - - tpr protein E (tprE) 330330..330476 - 48 3322593 TP0314 - - - T. pallidum predicted coding region TP0314 330499..331146 - 215 3322594 TP0315 - - - T. pallidum predicted coding region TP0315 332393..334663 - 756 3322589 TP0317 - - - tpr protein G (tprG) 334615..334794 - 59 3322595 TP0318 - - - T. pallidum predicted coding region TP0318 334823..335884 + 353 3322590 TP0319 - N COG1744 membrane lipoprotein (tmpC) 335894..336049 + 51 3322596 TP0320 - - - T. pallidum predicted coding region TP0320 336125..337726 + 533 3322598 TP0321 - G COG1129 ribose/galactose ABC transporter, ATP-binding protein (rbsA-2) 337636..338838 + 400 3322599 TP0322 - R COG1079 ribose/galactose ABC transporter, permease protein (rbsC-1) 338835..339785 + 316 3322600 TP0323 - R COG1079 ribose/galactose ABC transporter, permease protein (rbsC-2) 339889..341346 + 485 3322605 TP0324 - - - T. pallidum predicted coding region TP0324 341328..344294 + 988 3322601 TP0325 - - - conserved hypothetical protein 344276..346837 + 853 3322602 TP0326 - M COG0729 outer membrane protein 346894..347412 + 172 3322603 TP0327 - M COG2825 cationic outer membrane protein (ompH) 347468..350170 + 900 3322604 TP0328 - L COG0249 DNA mismatch repair protein (mutS) 350288..352012 + 574 3322607 TP0329 - E COG0112 serine hydroxymethyltransferase (glyA) 351986..353782 - 598 3322608 TP0330 - O COG0465 cell division protein, putative 354012..355478 - 488 3322609 TP0331 - G COG0362 phosphogluconate dehydrogenase (gnd) 355494..355619 + 41 3322617 TP0332 - - - T. pallidum predicted coding region TP0332 355657..356349 + 230 3322610 TP0333 - M COG2834 conserved hypothetical protein 356374..357591 + 405 3322611 TP0334 - S COG1426 conserved hypothetical protein 357588..358130 - 180 3322618 TP0335 - - - T. pallidum predicted coding region TP0335 357973..359673 + 566 3322612 TP0336 - R COG0658 comE protein, putative 359654..360511 + 285 3322613 TP0337 - J COG0030 dimethyladenosine transferase (ksgA) 360529..361017 + 162 3322619 TP0338 - - - T. pallidum predicted coding region TP0338 361029..362024 + 331 3322614 TP0339 - J COG0564 conserved hypothetical protein 362010..363482 - 490 3322615 TP0340 - H COG0285 folylpolyglutamate synthetase (folC) 363501..364946 + 481 3322616 TP0341 - M COG0773 UDP-N-acetylmuramate--alanine ligase (murC) 365067..365627 + 186 3322621 TP0342 - F COG1102 cytidylate kinase (cmk) 365621..366454 + 277 3322622 TP0343 - L COG1194 A/G-specific adenine glycosylase, putative 366459..369881 - 1140 3322623 TP0344 - L COG1197 transcription-repair coupling factor (trcF) 370034..371125 + 363 3322624 TP0345 - M COG0472 phospho-N-acetylmuramoyl-pentapeptide-transferase (mraY) 371282..371983 + 233 3322628 TP0346 - - - T. pallidum predicted coding region TP0346 371952..372782 + 276 3322629 TP0347 - - - T. pallidum predicted coding region TP0347 372516..373925 - 469 3322630 TP0348 - - - T. pallidum predicted coding region TP0348 373895..374425 - 176 3322625 TP0349 - O COG1047 peptidyl-prolyl cis-trans isomerase, FKBP-type (slyD) 374639..375925 + 428 3322626 TP0350 - E COG0014 glutamate-5-semialdehyde dehydrogenase (proA) 375922..376812 + 296 3322627 TP0351 - E COG0263 glutamate 5-kinase (proB) 376944..377201 + 85 3322644 TP0352 - - - T. pallidum predicted coding region TP0352 377198..377707 - 169 3322632 TP0353 - L COG0328 ribonuclease H (rnhA) 377970..378596 + 208 3322633 TP0354 - F COG0125 thymidylate kinase (tmk) 378563..378946 - 127 3322645 TP0355 - - - T. pallidum predicted coding region TP0355 379151..379468 + 105 3322634 TP0356 - K COG0724 RNA-binding protein, putative 379570..380310 + 246 3322635 TP0357 - H COG0340 biotin--acetyl-CoA-carboxylase ligase (birA) 380315..381895 - 526 3322636 TP0358 - S COG1543 conserved hypothetical protein 381907..382542 - 211 3322646 TP0359 - - - T. pallidum predicted coding region TP0359 382753..382929 + 58 3322637 TP0360 - - - conserved hypothetical protein 382926..383774 - 282 3322638 TP0361 - I COG0204 lysophosphatidic acid acyltransferase, putative 383850..384086 + 78 3322639 TP0362 - J COG0227 ribosomal protein L28 (rpmB) 384578..387016 + 812 3322640 TP0363 - N COG0643 chemotaxis histidine kinase (cheA) 387010..388377 + 455 3322641 TP0364 - N COG0835 purine-binding chemotaxis protein (cheW-1) 388399..388863 + 154 3322642 TP0365 - N COG1406 chemotaxis protein (cheX) 388876..389310 + 144 3322643 TP0366 - T COG0784 chemotaxis response regulator (cheY) 389614..392439 + 941 3322648 TP0367 - D COG1196 chromosome segregation protein, putative 392439..392774 + 111 3322652 TP0368 - - - T. pallidum predicted coding region TP0368 392771..394321 + 516 3322653 TP0369 - - - T. pallidum predicted coding region TP0369 394389..394805 - 138 3322654 TP0370 - - - T. pallidum predicted coding region TP0370 394779..395654 + 291 3322649 TP0371 - I COG1947 conserved hypothetical protein 395776..396366 + 196 3322650 TP0372 - J COG1825 general stress protein (ctc) 396426..397859 + 477 3322651 TP0373 - D COG0037 conserved hypothetical protein 397795..400170 + 791 3322655 TP0374 - - - T. pallidum predicted coding region TP0374 400328..400537 + 69 3322674 TP0375 - - - T. pallidum predicted coding region TP0375 400853..401758 - 301 3322675 TP0376 - - - T. pallidum predicted coding region TP0376 401827..401952 + 41 3322657 TP0377 - - - conserved hypothetical protein 401949..402329 + 126 3322658 TP0378 - N COG1580 flagellar protein, putative 402404..405154 - 916 3322659 TP0379 - N COG0653 preprotein translocase subunit (secA) 405261..407081 - 606 3322660 TP0380 - L COG1061 DNA repair helicase, putative 407219..407935 - 238 3322676 TP0381 - - - T. pallidum predicted coding region TP0381 408019..408141 + 40 3322677 TP0382 - - - T. pallidum predicted coding region TP0382 408169..408618 + 149 3322661 TP0383 - S COG2001 conserved hypothetical protein 408615..409754 + 379 3322662 TP0384 - M COG0275 conserved hypothetical protein 409767..410141 + 124 3322663 TP0385 - - - conserved hypothetical protein 410125..411504 + 459 3322664 TP0386 - M COG0770 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (murF) 411501..412655 + 384 3322665 TP0387 - D COG0772 cell division protein (ftsW) 412633..413448 + 271 3322666 TP0388 - M COG1589 cell division protein (ftsQ) 413461..414705 + 414 3322667 TP0389 - D COG0849 cell division protein (ftsA) 414751..416007 + 418 3322668 TP0390 - D COG0206 cell division protein (ftsZ) 416004..416924 + 306 3322669 TP0391 - L COG0582 integrase/recombinase (codV) 416707..417666 + 319 3322670 TP0392 - R COG0457 conserved hypothetical protein 417663..418571 + 302 3322671 TP0393 - L COG0758 smf protein (smf) 418604..420799 + 731 3322672 TP0394 - L COG0551 DNA topoisomerase I (topA) 420792..421685 + 297 3322673 TP0395 - L COG0582 integrase/recombinase (xprB) 421833..422243 + 136 3322679 TP0396 - N COG1815 flagellar basal-body rod protein (flgB) 422328..422717 + 129 3322680 TP0397 - N COG1558 flagellar basal-body rod protein (flgC) 422773..423147 + 124 3322681 TP0398 - N COG1677 flagellar hook-basal body complex protein (fliE) 423264..424967 + 567 3322682 TP0399 - N COG1766 flagellar basal-body M ring protein (fliF) 424972..426030 + 352 3322683 TP0400 - N COG1536 flagellar motor switch protein (fliG-2) 426078..427007 + 309 3322684 TP0401 - N COG1317 flagellar assembly protein (fliH) 427035..428378 + 447 3322685 TP0402 - N COG1157 flagellum-specific ATP synthase (fliI) 428407..428859 + 150 3322686 TP0403 - N COG2882 flagellar protein, putative 428856..429389 - 177 3322690 TP0404 - - - T. pallidum predicted coding region TP0404 429386..429835 - 149 3322688 TP0405 - S COG1357 mcbG protein, putative 430026..430832 + 268 3322687 TP0406 - M COG0796 glutamate racemase (murI) 430960..431634 + 224 3322689 TP0407 - R COG1011 phosphoglycolate phosphatase (gph-1) 431713..434967 + 1084 3322691 TP0408 - - - T. pallidum predicted coding region TP0408 435007..435192 + 61 3322692 TP0409 - - - T. pallidum predicted coding region TP0409 435457..437208 + 583 3322694 TP0410 - N COG0342 protein-export membrane protein (secD) 437205..438467 + 420 3322695 TP0411 - N COG0341 protein-export membrane protein (secF) 438543..438848 - 101 3322696 TP0412 - - - conserved hypothetical protein 438867..440765 - 632 3322697 TP0413 - G COG1109 phosphoglucomutase 440868..442223 + 451 3322698 TP0414 - E COG1115 D-alanine glycine permease (dagA) 442204..442737 + 177 3322703 TP0415 - - - T. pallidum predicted coding region TP0415 442684..444042 - 452 3322699 TP0416 - N COG0541 signal recognition particle protein (ffh) 444035..445714 - 559 3322700 TP0417 - M COG0815 apolipoprotein N-acyltransferase (cutE) 445741..446934 + 397 3322701 TP0418 - G COG0153 galactokinase 446931..447494 + 187 3322702 TP0419 - R COG0496 survival protein, putative 447475..447702 + 75 3322704 TP0420 - - - T. pallidum predicted coding region TP0420 447836..449887 + 683 3322706 TP0421 - - - conserved hypothetical protein 449871..450896 + 341 3322715 TP0422 - - - T. pallidum predicted coding region TP0422 450921..451727 + 268 3322707 TP0423 - - - conserved hypothetical protein 451930..452628 + 232 3322708 TP0424 - C COG1390 V-type ATPase, subunit E, putative 452606..452866 + 86 3322716 TP0425 - - - T. pallidum predicted coding region TP0425 453008..454777 + 589 3322709 TP0426 - C COG1155 V-type ATPase, subunit A (atpA-1) 454781..456073 + 430 3322710 TP0427 - C COG1156 V-type ATPase, subunit B (atpB-1) 456085..456705 + 206 3322711 TP0428 - C COG1394 V-type ATPase, subunit D (atpD-1) 456702..458570 + 622 3322712 TP0429 - C COG1269 V-type ATPase, subunit I (atpI-1) 458607..459029 + 140 3322713 TP0430 - C COG0636 V-type ATPase, subunit K (atpK-1) 459063..459884 + 273 3322714 TP0431 - K COG1521 conserved hypothetical protein 459927..460478 + 183 3322717 TP0432 - - - T. pallidum predicted coding region TP0432 460533..461303 + 256 3322718 TP0433 - - - T. pallidum predicted coding region TP0433 461245..461928 + 227 3322719 TP0434 - - - T. pallidum predicted coding region TP0434 462025..462495 - 156 3322721 TP0435 - M COG3015 lipoprotein, 17 kDa (tpp17) 462626..463708 - 360 3322722 TP0436 - R COG0618 conserved hypothetical protein 463674..464204 - 176 3322733 TP0437 - - - T. pallidum predicted coding region TP0437 464234..465043 + 269 3322723 TP0438 - F COG0127 conserved hypothetical protein 465130..465642 + 170 3322724 TP0439 - N COG0835 purine-binding chemotaxis protein (cheW-2) 465732..466883 + 383 3322725 TP0440 - M COG0399 spore coat polysaccharide biosynthesis protein, putative 466880..467797 + 305 3322726 TP0441 - R COG0061 conserved hypothetical protein 467790..469511 + 573 3322727 TP0442 - L COG0497 DNA repair protein (recN) 469453..470307 + 284 3322728 TP0443 - - - conserved hypothetical protein 470313..471341 + 342 3322729 TP0444 - M COG0739 conserved hypothetical protein 471477..472106 + 209 3322730 TP0445 - R COG0693 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme (thiJ) 472148..473362 + 404 3322731 TP0446 - M COG0821 gcpE protein (gcpE) 473359..474483 + 374 3322734 TP0447 - - - T. pallidum predicted coding region TP0447 474541..475623 + 360 3322732 TP0448 - F COG0035 uracil phosphoribosyltransferase, putative 475627..476217 + 196 3322735 TP0449 - - - T. pallidum predicted coding region TP0449 476354..478405 + 683 3322737 TP0450 - J COG0480 translation elongation factor G (fusA-1) 478394..478576 - 60 3322741 TP0451 - - - T. pallidum predicted coding region TP0451 478855..482130 + 1091 3322738 TP0452 - J COG0060 isoleucyl-tRNA synthetase (ileS) 482117..482980 + 287 3322742 TP0453 - - - T. pallidum predicted coding region TP0453 483330..484019 - 229 3322743 TP0454 - - - T. pallidum predicted coding region TP0454 484016..485020 - 334 3322739 TP0455 - - - conserved hypothetical protein 485077..486393 - 438 3322744 TP0456 - - - T. pallidum predicted coding region TP0456 486461..488242 + 593 3322740 TP0457 - - - conserved hypothetical protein 488333..488911 + 192 3322746 TP0458 - K COG1386 conserved hypothetical protein 488940..489725 + 261 3322747 TP0459 - J COG1187 conserved hypothetical protein 489768..490475 + 235 3322753 TP0460 - R COG0457 T. pallidum predicted coding region TP0460 490476..490835 + 119 3322754 TP0461 - K COG1396 T. pallidum predicted coding region TP0461 491040..491882 + 280 3322755 TP0462 - - - T. pallidum predicted coding region TP0462 491887..492219 + 110 3322756 TP0463 - - - T. pallidum predicted coding region TP0463 492278..493030 - 250 3322748 TP0464 - R COG0220 conserved hypothetical protein 493027..493899 - 290 3322757 TP0465 - - - T. pallidum predicted coding region TP0465 493832..495001 - 389 3322759 TP0466 - - - T. pallidum predicted coding region TP0466 494992..495240 + 82 3322758 TP0467 - - - T. pallidum predicted coding region TP0467 495210..495740 - 176 3322749 TP0468 - R COG0457 conserved hypothetical protein 495698..497161 - 487 3322750 TP0469 - R COG0457 conserved hypothetical protein 497154..498263 - 369 3322751 TP0470 - R COG0457 conserved hypothetical protein 498255..499664 + 469 3322760 TP0471 - R COG0457 T. pallidum predicted coding region TP0471 499677..501752 - 691 3322752 TP0472 - L COG0322 excinuclease ABC, subunit C (uvrC) 501827..502471 - 214 3322768 TP0473 - - - T. pallidum predicted coding region TP0473 502536..503273 - 245 3322762 TP0474 - S COG0217 conserved hypothetical protein 503414..505021 - 535 3322763 TP0475 - G COG0166 glucose-6-phosphate isomerase (gpi) 505085..506431 - 448 3322764 TP0476 - C COG0282 acetate kinase (ack) 506498..507223 - 241 3322765 TP0477 - G COG0363 glucose-6-phosphate 1-dehydrogenase, putative 507284..508831 - 515 3322766 TP0478 - G COG0364 glucose-6-phosphate 1-dehydrogenase (zwf) 508904..509578 - 224 3322769 TP0479 - - - T. pallidum predicted coding region TP0479 509690..510178 + 162 3322770 TP0480 - - - T. pallidum predicted coding region TP0480 510210..511643 + 477 3322771 TP0481 - - - T. pallidum predicted coding region TP0481 511610..512458 + 282 3322772 TP0482 - - - T. pallidum predicted coding region TP0482 512524..513648 - 374 3322773 TP0483 - - - T. pallidum predicted coding region TP0483 513635..515650 - 671 3322774 TP0484 - - - T. pallidum predicted coding region TP0484 515544..517388 - 614 3322767 TP0485 - T COG2114 adenylate cyclase 517526..518980 - 484 3322776 TP0486 - - - antigen, p83/100 519069..520646 - 525 3322784 TP0487 - - - T. pallidum predicted coding region TP0487 520874..523411 + 845 3322777 TP0488 - N COG0840 methyl-accepting chemotaxis protein (mcp2-1) 523859..524827 + 322 3322778 TP0489 - R COG1235 conserved hypothetical protein 524824..525012 + 62 3322779 TP0490 - - - conserved hypothetical protein 525019..526053 + 344 3322780 TP0491 - R COG1559 conserved hypothetical protein 526077..527894 + 605 3322781 TP0492 - L COG0358 DNA primase (dnaG) 527891..529726 + 611 3322782 TP0493 - K COG0568 RNA polymerase sigma-70 factor (rpoD) 529736..530557 + 273 3322783 TP0494 - R COG1579 conserved hypothetical protein 530646..530795 - 49 3322793 TP0495 - - - T. pallidum predicted coding region TP0495 530887..531876 + 329 3322786 TP0496 - R COG0457 conserved hypothetical protein 531889..532923 + 344 3322787 TP0497 - D COG1077 rod shape-determining protein (mreB) 532928..533791 + 287 3322788 TP0498 - M COG1792 rod shape-determining protein (mreC) 533788..534294 + 168 3322789 TP0499 - M COG2891 rod shape-determining protein (mreD) 534295..536169 + 624 3322790 TP0500 - M COG0768 penicillin-binding protein (pbp-1) 536166..537467 + 433 3322791 TP0501 - D COG0772 rod shape-determining protein (rodA) 537493..538389 + 298 3322794 TP0502 - R COG0666 T. pallidum predicted coding region TP0502 538368..538931 + 187 3322795 TP0503 - - - T. pallidum predicted coding region TP0503 538913..539053 + 46 3322796 TP0504 - - - T. pallidum predicted coding region TP0504 539062..540396 - 444 3322792 TP0505 - - - hexokinase (hxk) 541131..542459 + 442 3322798 TP0506 - O COG0544 trigger factor (tig) 542452..543063 + 203 3322799 TP0507 - N COG0740 ATP-dependent Clp protease proteolytic component (clpP-1) 543050..544297 + 415 3322800 TP0508 - O COG1219 ATP-dependent Clp protease subunit X (clpX) 544394..544960 + 188 3322801 TP0509 - O COG0450 alkyl hydroperoxide reductase (ahpC) 545141..546958 - 605 3322802 TP0510 - N COG0481 GTP-binding membrane protein (lepA) 547001..547627 + 208 3322803 TP0511 - K COG1329 transcription factor (carD) 547672..548871 + 399 3322804 TP0512 - I COG1211 conserved hypothetical protein 548945..550345 + 466 3322805 TP0513 - P COG0569 K+ transport protein (trkA) 550459..553341 + 960 3322806 TP0514 - L COG0178 excinuclease ABC, subunit A (uvrA) 553338..556313 + 991 3322807 TP0515 - M COG1452 conserved hypothetical protein 556327..557907 - 526 3322808 TP0516 - R COG0728 virulence factor (mviN) 557904..558494 - 196 3322809 TP0517 - L COG0817 Holliday junction nuclease (ruvC) 558476..559168 - 230 3322810 TP0518 - H COG1564 conserved hypothetical protein 559165..560541 - 458 3322811 TP0519 - T COG2204 response regulatory protein (atoC) 561736..563007 - 423 3322812 TP0521 - L COG0470 DNA polymerase III, gamma and tau subunits, putative 563018..563497 - 159 3322815 TP0522 - R COG1286 T. pallidum predicted coding region TP0522 563494..564648 - 384 3322813 TP0523 - M COG0707 UDP-N-glucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (murG) 564652..567297 - 881 3322814 TP0524 - O COG0466 ATP-dependent protease LA (lon-2) 567433..567996 + 187 3322817 TP0525 - J COG0231 translation elongation factor P (efp) 568144..570150 + 668 3322818 TP0526 - L COG1643 ATP-dependent helicase (hrpA) 570198..570827 - 209 3322819 TP0527 - C COG1394 V-type ATPase, subunit D (atpD-2) 570922..572364 - 480 3322820 TP0528 - C COG1156 V-type ATPase, subunit B (atpB-2) 572361..574178 - 605 3322821 TP0529 - C COG1155 V-type ATPase, subunit A (atpA-2) 574175..574801 - 208 3322822 TP0530 - - - V-type ATPase, subunit E, putative 574807..575145 - 112 3322823 TP0531 - C COG1436 V-type ATPase, subunit F, putative 575765..577129 - 454 3322824 TP0533 - C COG1269 V-type ATPase, subunit I (atpI-2) 577122..578147 - 341 3322825 TP0534 - - - T. pallidum predicted coding region TP0534 578151..578363 - 70 3322826 TP0535 - - - T. pallidum predicted coding region TP0535 578504..578905 - 133 3322835 TP0536 - N COG1314 T. pallidum predicted coding region TP0536 579055..579804 - 249 3322828 TP0537 - G COG0149 triosephosphate isomerase (tpi) 579955..581214 - 419 3322829 TP0538 - G COG0126 phosphoglycerate kinase (pgk) 581186..581407 + 73 3322836 TP0539 - - - T. pallidum predicted coding region TP0539 581688..582059 + 123 3322830 TP0540 - T COG1366 anti-sigma F factor antagonist (spoIIAA-2) 582189..583148 + 319 3322831 TP0541 - R COG1159 GTP-binding protein (era) 583145..584866 - 573 3322832 TP0542 - G COG0205 pyrophosphate--fructose 6-phosphate 1-phosphotransferase, beta subunit 584926..585609 - 227 3322833 TP0543 - L COG0632 Holliday junction DNA helicase (ruvA) 585651..587519 - 622 3322837 TP0544 - R COG2374 T. pallidum predicted coding region TP0544 587544..588608 - 354 3322834 TP0545 - G COG1879 methylgalactoside ABC transporter, periplasmic galactose-binding protein (mglB-1) 588693..590693 - 666 3322839 TP0546 - O COG0265 periplasmic serine protease, putative 590405..591535 - 376 3322840 TP0547 - I COG0761 penicillin tolerance protein (lytB) 591679..592983 + 434 3322844 TP0548 - - - T. pallidum predicted coding region TP0548 593081..595525 + 814 3322841 TP0549 - O COG0542 ATPase (clpC) 595566..597053 - 495 3322842 TP0550 - R COG0486 thiophene and furan oxidation protein (thdF) 597057..598145 - 362 3322843 TP0551 - I COG0671 phosphatase 598158..598691 - 177 3322845 TP0552 - - - T. pallidum predicted coding region TP0552 598935..600146 + 403 3322847 TP0553 - R COG0628 conserved hypothetical integral membrane protein 600181..600849 + 222 3322848 TP0554 - R COG0546 phosphoglycolate phosphatase (gph-2) 600913..602103 - 396 3322849 TP0555 - C COG1301 glutamate/ aspartate transporter, putative 602326..603318 - 330 3322850 TP0556 - E COG2502 asparagine synthetase (asnA) 603423..604136 + 237 3322851 TP0557 - - - conserved hypothetical protein 604166..605074 + 302 3322852 TP0558 - S COG2215 conserved hypothetical integral membrane protein 605136..606341 + 401 3322853 TP0559 - H COG0301 conserved hypothetical protein 606394..608379 - 661 3322854 TP0560 - G COG0021 transketolase A (tktA) 608490..609341 - 283 3322855 TP0561 - R COG1512 conserved hypothetical protein 609512..610648 + 378 3322857 TP0562 - M COG2089 spore coat polysaccharide biosynthesis protein (spsE) 610639..611052 + 137 3322864 TP0563 - - - T. pallidum predicted coding region TP0563 611049..613085 + 678 3322865 TP0564 - - - T. pallidum predicted coding region TP0564 612967..614187 - 406 3322866 TP0565 - S COG2845 T. pallidum predicted coding region TP0565 614198..615685 - 495 3322858 TP0566 - M COG1696 alginate O-acetylation protein (algI) 615717..616337 - 206 3322859 TP0567 - - - conserved hypothetical protein 616416..617048 - 210 3322860 TP0568 - G COG0800 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxyphosphogluconate aldolase (eda) 617170..619494 - 774 3322861 TP0569 - E COG0006 aminopeptidase P 619519..620364 - 281 3322867 TP0570 - - - T. pallidum predicted coding region TP0570 620391..621056 - 221 3322862 TP0571 - S COG1704 Tp70 protein 621074..622156 - 360 3322869 TP0572 - S COG2717 T. pallidum predicted coding region TP0572 622147..622239 + 30 3322868 TP0573 - - - T. pallidum predicted coding region TP0573 622266..623570 - 434 3322863 TP0574 - - - carboxypeptidase, 47 kDa 625802..626908 + 368 3322871 TP0576 - J COG1186 peptide chain release factor 2 (prfB) 626800..628644 + 614 3322877 TP0577 - - - T. pallidum predicted coding region TP0577 628651..629538 + 295 3322872 TP0578 - N COG0552 cell division protein (ftsY) 629535..630311 + 258 3322878 TP0579 - - - T. pallidum predicted coding region TP0579 630304..631593 + 429 3322873 TP0580 - R COG0577 conserved hypothetical integral membrane protein 631586..632266 + 226 3322874 TP0581 - R COG1136 ABC transporter, ATP-binding protein 632263..633750 + 495 3322875 TP0582 - R COG0577 conserved hypothetical integral membrane protein 633734..633859 - 41 3322880 TP0583 - - - T. pallidum predicted coding region TP0583 633846..635255 + 469 3322879 TP0584 - - - T. pallidum predicted coding region TP0584 635248..636891 + 547 3322876 TP0585 - E COG0747 oligopeptide ABC transporter, periplasmic binding protein (oppA) 636980..639616 + 878 3322882 TP0586 - J COG0495 leucyl-tRNA synthetase (leuS) 639596..639826 - 76 3322889 TP0587 - - - T. pallidum predicted coding region TP0587 639853..640617 - 254 3322883 TP0588 - L COG1466 conserved hypothetical protein 640705..640971 - 88 3322884 TP0589 - G COG1925 phosphocarrier protein HPr (ptsH) 640943..641059 - 38 3322885 TP0590 - - - ribosomal protein L36 (rpmJ-2) 641016..641975 - 319 3322886 TP0591 - T COG1493 HPr kinase (ptsK) 642738..644240 + 500 3322890 TP0592 - - - T. pallidum predicted coding region TP0592 644177..646210 + 677 3322891 TP0593 - - - T. pallidum predicted coding region TP0593 646297..646905 - 202 3322892 TP0594 - - - T. pallidum predicted coding region TP0594 646933..647568 - 211 3322887 TP0595 - F COG0563 adenylate kinase (adk) 647592..648704 - 370 3322888 TP0596 - J COG0617 polynucleotide adenylyltransferase (pcnB) 648812..649090 - 92 3322901 TP0597 - - - T. pallidum predicted coding region TP0597 649054..650871 - 605 3322902 TP0598 - - - T. pallidum predicted coding region TP0598 650908..651564 - 218 3322903 TP0599 - - - T. pallidum predicted coding region TP0599 651571..652923 - 450 3322894 TP0600 - M COG0750 zinc protease, putative 652920..654071 - 383 3322895 TP0601 - I COG0743 conserved hypothetical protein 654047..654910 - 287 3322896 TP0602 - I COG0575 phosphatidate cytidylyltransferase (cdsA) 654907..655593 - 228 3322897 TP0603 - I COG0020 conserved hypothetical protein 655599..656150 - 183 3322898 TP0604 - J COG0233 ribosome recycling factor 656254..657126 - 290 3322899 TP0605 - J COG0264 translation elongation factor TS (tsf) 657217..658092 - 291 3322900 TP0606 - J COG0052 ribosomal protein S2 (rpsB) 658061..658207 - 48 3322904 TP0607 - - - T. pallidum predicted coding region TP0607 658457..659347 - 296 3322905 TP0608 - - - T. pallidum predicted coding region TP0608 659665..661236 + 523 3322907 TP0609 - J COG0017 asparaginyl-tRNA synthetase (asnS) 661246..663327 + 693 3322908 TP0610 - - - tpr protein H (tprH) 663469..664248 + 259 3322909 TP0611 - R COG0396 ABC transporter, ATP-binding protein 664329..665768 + 479 3322910 TP0612 - R COG0719 conserved hypothetical protein 665795..666943 + 382 3322911 TP0613 - R COG0719 conserved hypothetical protein 666940..668154 + 404 3322912 TP0614 - E COG0520 nitrogen fixation protein (nifS-1) 668205..668648 + 147 3322913 TP0615 - C COG0822 nitrogen fixation protein (nifU) 668669..669433 + 254 3322914 TP0616 - G COG0120 ribose 5-phosphate isomerase (rpiA) 669460..669738 - 92 3322915 TP0617 - - - T. pallidum predicted coding region TP0617 669834..670193 - 119 3322924 TP0618 - - - T. pallidum predicted coding region TP0618 670249..671061 - 270 3322925 TP0619 - - - T. pallidum predicted coding region TP0619 671058..672887 - 609 3322917 TP0620 - - - tpr protein I (tprI) 672945..675221 - 758 3322918 TP0621 - - - tpr protein J (tprJ) 675281..677062 - 593 3322926 TP0622 - - - T. pallidum predicted coding region TP0622 676479..678818 + 779 3322919 TP0623 - M COG0741 membrane-bound lytic murein transglycosylase D (dniR) 678822..680252 + 476 3322920 TP0624 - M COG2885 conserved hypothetical protein 680252..681004 + 250 3322927 TP0625 - - - T. pallidum predicted coding region TP0625 681001..682176 + 391 3322921 TP0626 - L COG0420 exonuclease, putative 682173..685316 + 1047 3322922 TP0627 - L COG0419 exonuclease (sbcC) 685313..686794 + 493 3322923 TP0628 - H COG1488 conserved hypothetical protein 686965..687789 + 274 3322936 TP0629 - - - T. pallidum predicted coding region TP0629 687959..688870 + 303 3322929 TP0630 - N COG1352 chemotaxis protein methyltransferase (cheR) 688917..690128 + 403 3322930 TP0631 - N COG2201 protein-glutamate methylesterase (cheB) 690233..691246 + 337 3322931 TP0632 - J COG0180 tryptophanyl-tRNA synthetase (trsA) 691387..692262 + 291 3322932 TP0633 - O COG0229 protein-methionine-S-oxide reductase (msrA) 692381..694852 + 823 3322933 TP0634 - L COG0272 DNA ligase (lig) 694887..695657 - 256 3322934 TP0636 - L COG1381 conserved hypothetical protein 695695..696645 - 316 3322935 TP0637 - J COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase (miaA) 696869..697303 - 144 3322950 TP0638 - - - T. pallidum predicted coding region TP0638 697723..699687 + 654 3322938 TP0639 - N COG0840 methyl-accepting chemotaxis protein (mcp2-2) 699711..701555 + 614 3322939 TP0640 - N COG0840 methyl-accepting chemotaxis protein (mcp2-3) 701573..702901 - 442 3322940 TP0641 - J COG0124 histidyl-tRNA synthetase (hisS) 703042..704802 + 586 3322941 TP0642 - G COG1109 phosphomannomutase (manB) 704799..705446 + 215 3322942 TP0643 - L COG0847 DNA polymerase III, subunit epsilon (dnaQ) 705443..707029 - 528 3322943 TP0644 - J COG1384 lysyl-tRNA synthetase (lysS-1) 707060..707236 - 58 3322951 TP0645 - - - T. pallidum predicted coding region TP0645 707295..708617 - 440 3322944 TP0646 - - - conserved hypothetical protein 708529..709809 - 426 3322945 TP0647 - J COG0172 seryl-tRNA synthetase (serS) 709859..711907 - 682 3322946 TP0648 - R COG0457 conserved hypothetical protein 711852..712649 - 265 3322947 TP0649 - R COG1253 hemolysin (tlyC) 712637..713119 - 160 3322948 TP0650 - R COG0319 conserved hypothetical protein 713125..715536 - 803 3322949 TP0651 - R COG1480 conserved hypothetical integral membrane protein 715712..716851 + 379 3322953 TP0652 - G COG1130 spermidine/putrescine ABC transporter, ATP-binding protein (potA) 716848..717747 + 299 3322954 TP0653 - E COG1176 spermidine/putrescine ABC transporter, permease protein (potB) 717740..718558 + 272 3322955 TP0654 - E COG1177 spermidine/putrescine ABC transporter, permease protein (potC) 718594..719640 + 348 3322956 TP0655 - E COG0687 spermidine/putrescine ABC transporter, periplasmic binding protein (potD) 719609..719710 + 33 3322965 TP0656 - - - T. pallidum predicted coding region TP0656 719695..719916 - 73 3322957 TP0657 - T COG1551 carbon storage regulator (csrA) 719910..720362 - 150 3322958 TP0658 - S COG1699 transmembrane protein, putative 720381..721631 - 416 3322959 TP0659 - N COG1344 flagellar hook-associated protein 3 (flgL) 721665..723542 - 625 3322960 TP0660 - N COG1256 flagellar hook-associated protein 1 (flgK) 723648..724160 - 170 3322966 TP0661 - - - T. pallidum predicted coding region TP0661 724283..725281 - 332 3322961 TP0662 - G COG0191 fructose-bisphosphate aldolase (cbbA) 725548..726276 + 242 3322962 TP0663 - - - outer membrane protein, putative 726273..726998 + 241 3322963 TP0664 - - - flagellar filament outer layer protein (flaA-2) 727016..727771 - 251 3322967 TP0665 - - - T. pallidum predicted coding region TP0665 727768..728061 - 97 3322968 TP0666 - - - T. pallidum predicted coding region TP0666 728105..729772 - 555 3322964 TP0667 - J COG0441 uridine kinase (udk) 730003..730611 - 202 3322970 TP0668 - S COG0762 conserved hypothetical integral membrane protein 730608..734120 - 1170 3322971 TP0669 - L COG0587 DNA polymerase III, subunit alpha (dnaE) 734274..735464 - 396 3322972 TP0670 - M COG1181 D-alanine--D-alanine ligase (ddlA) 735466..736500 - 344 3322973 TP0671 - - - sn-1,2-diacylglycerol cholinephosphotransferase, putative 736531..737919 - 462 3322974 TP0672 - J COG0423 glycyl-tRNA synthetase (glyS) 738054..739667 - 537 3322975 TP0673 - J COG0008 glutamyl-tRNA synthetase (gltX) 739845..740453 + 202 3322984 TP0674 - S COG2840 T. pallidum predicted coding region TP0674 740459..741457 + 332 3322985 TP0675 - - - T. pallidum predicted coding region TP0675 741469..741747 - 92 3322986 TP0676 - - - T. pallidum predicted coding region TP0676 741769..742377 - 202 3322987 TP0677 - - - T. pallidum predicted coding region TP0677 742631..743554 + 307 3322988 TP0678 - - - T. pallidum predicted coding region TP0678 743551..743868 + 105 3322989 TP0679 - - - T. pallidum predicted coding region TP0679 743909..744967 - 352 3322977 TP0680 - O COG0533 o-sialoglycoprotein endopeptidase (gcp) 745018..746091 - 357 3322978 TP0681 - M COG0787 alanine racemase (alr) 746180..746782 - 200 3322979 TP0682 - J COG0293 cell division protein (ftsJ) 746875..747969 + 364 3322980 TP0683 - H COG0142 octaprenyl-diphosphate synthase 748262..749473 + 403 3322981 TP0684 - G COG1879 methylgalactoside ABC transporter, periplasmic galactose-binding protein (mglB-2) 749593..751083 + 496 3322982 TP0685 - G COG1129 methylgalactoside ABC transporter, ATP binding protein (mglA) 751098..752693 + 531 3322983 TP0686 - G COG1172 methylgalactoside ABC transporter, permease protein (mglC) 752821..754881 - 686 3322991 TP0687 - L COG1200 DNA recombinase (recG) 754937..755950 - 337 3322992 TP0688 - S COG1619 immunity protein (mccF) 755951..757333 - 460 3322993 TP0689 - R COG1160 GTP-binding protein 757369..757950 - 193 3322999 TP0690 - - - T. pallidum predicted coding region TP0690 757943..758701 - 252 3322994 TP0691 - S COG1354 conserved hypothetical protein 758729..759952 - 407 3322995 TP0692 - L COG0468 recA protein (recA) 760213..761535 - 440 3323000 TP0693 - - - T. pallidum predicted coding region TP0693 761695..762372 + 225 3322996 TP0694 - H COG0212 5,10-methenyltetrahydrofolate synthetase, putative 762460..764253 + 597 3322997 TP0695 - I COG0439 phosphoribosylglycinamide formyltransferase, putative 764241..765077 - 278 3322998 TP0696 - Q COG1335 nicotinamidase, putative 765139..765747 - 202 3323001 TP0697 - - - T. pallidum predicted coding region TP0697 765778..766323 - 181 3323002 TP0698 - - - T. pallidum predicted coding region TP0698 766320..766430 - 36 3323003 TP0699 - - - T. pallidum predicted coding region TP0699 766436..766828 - 130 3323004 TP0700 - - - T. pallidum predicted coding region TP0700 766966..767169 - 67 3323006 TP0701 - K COG1758 DNA-directed RNA polymerase, putative 767339..767875 - 178 3323007 TP0702 - M COG0739 conserved hypothetical protein 767890..768570 - 226 3323029 TP0703 - - - T. pallidum predicted coding region TP0703 768570..770690 - 706 3323008 TP0704 - L COG0608 single-stranded-DNA-specific exonuclease (recJ) 770833..773487 - 884 3323009 TP0705 - M COG0744 penicillin-binding protein (pbp-2) 773784..774710 - 308 3323010 TP0706 - M COG0739 conserved hypothetical protein 774772..775251 - 159 3323030 TP0707 - - - T. pallidum predicted coding region TP0707 775317..775832 + 171 3323031 TP0708 - - - T. pallidum predicted coding region TP0708 775888..776676 + 262 3323011 TP0709 - K COG1191 RNA polymerase sigma-28 factor 776685..778655 + 656 3323012 TP0710 - S COG1315 conserved hypothetical protein 778692..779264 + 190 3323013 TP0711 - - - conserved hypothetical protein 779279..780193 - 304 3323014 TP0712 - D COG0455 ATP-binding protein (ylxH-1) 780165..781478 - 437 3323015 TP0713 - N COG1419 flagellar-associated GTP-binding protein (flhF) 781513..783636 - 707 3323016 TP0714 - N COG1298 flagellar biosynthesis protein (flhA) 783645..784775 - 376 3323017 TP0715 - N COG1377 flagellar biosynthetic protein (flhB) 784772..785569 - 265 3323018 TP0716 - N COG1684 flagellar biosynthetic protein (fliR) 785582..785866 - 94 3323019 TP0717 - N COG1987 flagellar biosynthetic protein (fliQ) 785885..786700 - 271 3323020 TP0718 - N COG1338 flagellar biosynthetic protein (fliP) 786697..787485 - 262 3323021 TP0719 - - - hypothetical protein 787421..788467 - 348 3323022 TP0720 - N COG1886 flagellar motor switch protein (fliY) 788460..789494 - 344 3323023 TP0721 - N COG1868 flagellar motor switch protein (fliM) 789516..790064 - 182 3323024 TP0722 - N COG1580 flagellar protein (fliL) 790043..790177 - 44 3323032 TP0723 - - - T. pallidum predicted coding region TP0723 790174..790890 - 238 3323025 TP0724 - N COG1360 flagellar motor rotation protein (motB) 790896..791675 - 259 3323026 TP0725 - N COG1291 flagellar motor rotation protein (motA) 791691..791888 - 65 3323027 TP0726 - N COG1582 flagellar protein (flbD) 791946..793337 - 463 3323028 TP0727 - N COG1749 flagellar hook protein (flgE) 793408..793869 - 153 3323034 TP0728 - N COG1843 flagellar hook assembly scaffolding protein (flgD) 793945..795588 - 547 3323036 TP0729 - - - treponemal aqueous protein (tap1) 795557..796654 + 365 3323035 TP0730 - I COG0558 conserved hypothetical protein 796674..797384 + 236 3323037 TP0731 - L COG0494 conserved hypothetical protein 797349..798296 - 315 3323038 TP0732 - H COG0190 methylenetetrahydrofolate dehydrogenase (folD) 798392..799051 + 219 3323045 TP0733 - - - T. pallidum predicted coding region TP0733 799084..799785 - 233 3323039 TP0734 - F COG0813 purine nucleoside phosphorylase (deoD) 799867..801423 - 518 3323040 TP0735 - E COG0493 glutamate synthase (gltA) 801426..802268 - 280 3323041 TP0736 - H COG0543 hydrogenase, gamma chain (hydG) 802502..803812 + 436 3323042 TP0737 - G COG1653 sugar ABC transporter, periplasmic binding protein (msmE) 803858..804193 - 111 3323043 TP0738 - S COG0799 conserved hypothetical protein 804190..805386 - 398 3323044 TP0739 - K COG1316 conserved hypothetical protein 805460..806026 - 188 3323047 TP0740 - H COG1713 conserved hypothetical protein 806154..806768 - 204 3323048 TP0741 - H COG1057 conserved hypothetical protein 806765..807895 - 376 3323049 TP0742 - R COG0536 GTP-binding protein (obg) 808013..808276 - 87 3323055 TP0743 - J COG0211 ribosomal protein L27 (rpl27) 808307..808633 - 108 3323050 TP0744 - J COG2868 conserved hypothetical protein 808646..808963 - 105 3323051 TP0745 - J COG0261 ribosomal protein L21 (rplU) 809070..811775 - 901 3323052 TP0746 - G COG0574 pyruvate, phosphate dikinase 811785..812819 - 344 3323056 TP0747 - - - T. pallidum predicted coding region TP0747 812908..814944 - 678 3323053 TP0748 - - - cytoplasmic filament protein A (cfpA) 814922..815143 - 73 3323057 TP0749 - - - T. pallidum predicted coding region TP0749 815113..815784 + 223 3323054 TP0750 - - - hypothetical protein 815821..816534 + 237 3323058 TP0751 - - - T. pallidum predicted coding region TP0751 816672..817814 - 380 3323068 TP0752 - - - T. pallidum predicted coding region TP0752 817895..818179 - 94 3323069 TP0753 - - - T. pallidum predicted coding region TP0753 818176..819546 - 456 3323060 TP0754 - J COG0621 conserved hypothetical protein 819588..820130 - 180 3323061 TP0755 - G COG1762 PTS system, nitrogen regulatory IIA component (ptsN-2) 820330..821289 - 319 3323062 TP0756 - J COG0223 methionyl-tRNA formyltransferase (fmt) 821293..821781 - 162 3323063 TP0757 - J COG0242 polypeptide deformylase (def) 821822..822031 - 69 3323064 TP0758 - J COG0828 ribosomal protein S21 (rpsU) 822150..822269 + 39 3323070 TP0759 - - - T. pallidum predicted coding region TP0759 822226..824184 + 652 3323065 TP0760 - M COG0768 penicillin-binding protein (pbp-3) 824165..825043 + 292 3323071 TP0761 - - - T. pallidum predicted coding region TP0761 825072..826253 + 393 3323072 TP0762 - - - T. pallidum predicted coding region TP0762 826315..827256 - 313 3323073 TP0763 - - - T. pallidum predicted coding region TP0763 827215..828390 + 391 3323066 TP0764 - T COG2206 conserved hypothetical protein 828372..830201 - 609 3323067 TP0765 - O COG0465 cell division protein (ftsH) 830604..831485 + 293 3323081 TP0766 - - - T. pallidum predicted coding region TP0766 831696..833783 + 695 3323075 TP0767 - J COG0480 translation elongation factor G (fusA-2) 833922..834959 + 345 3323076 TP0768 - - - membrane protein (tmpA) 834956..835933 + 325 3323077 TP0769 - - - outer membrane protein (tmpB) 835978..837927 + 649 3323078 TP0770 - L COG0513 ATP-dependent RNA helicase 837948..839729 - 593 3323079 TP0771 - P COG1283 conserved hypothetical integral membrane protein 839733..840557 + 274 3323082 TP0772 - - - T. pallidum predicted coding region TP0772 840597..841793 - 398 3323080 TP0773 - O COG0265 periplasmic serine protease DO (htrA-1) 842138..842812 + 224 3323084 TP0774 - S COG1285 Mg2+ transport protein (mgtC) 842892..843527 + 211 3323085 TP0775 - L COG0177 endonuclease III (nth) 843604..844380 - 258 3323086 TP0776 - R COG1040 conserved hypothetical protein 844433..844657 - 74 3323091 TP0777 - S COG1656 T. pallidum predicted coding region TP0777 844726..845637 - 303 3323087 TP0778 - R COG1694 mazG protein (mazG) 845634..846278 - 214 3323088 TP0779 - S COG0586 dedA protein (dedA) 846325..848364 - 679 3323089 TP0780 - H COG0171 NH(3)-dependent NAD(+) synthetase (nadE) 848401..848862 - 153 3323092 TP0781 - - - T. pallidum predicted coding region TP0781 848908..849351 - 147 3323093 TP0782 - M COG0739 T. pallidum predicted coding region TP0782 849380..850513 - 377 3323094 TP0783 - - - T. pallidum predicted coding region TP0783 850679..851278 + 199 3323095 TP0784 - - - T. pallidum predicted coding region TP0784 851275..851961 + 228 3323090 TP0785 - - - conserved hypothetical protein 852093..852806 + 237 3323097 TP0786 - R COG1137 ABC transporter, ATP-binding protein, putative 852853..853272 - 139 3323104 TP0787 - - - T. pallidum predicted coding region TP0787 853354..854244 + 296 3323105 TP0788 - - - T. pallidum predicted coding region TP0788 854257..855033 - 258 3323106 TP0789 - - - T. pallidum predicted coding region TP0789 855052..857718 - 888 3323098 TP0790 - R COG1033 antibiotic transport protein, putative 857861..858106 - 81 3323107 TP0791 - - - T. pallidum predicted coding region TP0791 858092..858952 + 286 3323099 TP0792 - N COG1344 flagellar filament 33 kDa core protein (flaB2) 859031..860650 + 539 3323108 TP0793 - - - T. pallidum predicted coding region TP0793 860687..861877 - 396 3323100 TP0794 - H COG0192 S-adenosylmethionine synthetase (metK) 861931..862089 + 52 3323109 TP0795 - - - T. pallidum predicted coding region TP0795 862078..863166 - 362 3323101 TP0796 - H COG1477 conserved hypothetical protein 863226..864017 - 263 3323102 TP0797 - E COG0345 1-pyrroline-5-carboxylate reductase (proC) 864068..866503 - 811 3323103 TP0798 - J COG0143 methionyl-tRNA synthetase (metG) 866536..866688 + 50 3323110 TP0799 - - - T. pallidum predicted coding region TP0799 866831..868303 + 490 3323112 TP0800 - M COG1686 serine-type D-Ala-D-Ala carboxypeptidase (dacC) 868364..870793 - 809 3323113 TP0801 - O COG0542 ATP-dependent Clp protease subunit A (clpA) 870839..871168 + 109 3323117 TP0802 - - - T. pallidum predicted coding region TP0802 871182..872390 + 402 3323118 TP0803 - R COG0618 T. pallidum predicted coding region TP0803 872468..873631 + 387 3323114 TP0804 - G COG1130 sugar ABC transporter, ATP-binding protein (ugpC) 873482..875761 - 759 3323115 TP0805 - K COG0557 exoribonuclease II (rnb) 875758..877254 - 498 3323116 TP0806 - S COG2348 femA protein, putative 877383..877571 + 62 3323120 TP0807 - J COG0333 ribosomal protein L32 (rpmF) 877632..877868 + 78 3323121 TP0808 - I COG0236 acyl carrier protein (acpP) 877865..878629 + 254 3323122 TP0809 - K COG0571 ribonuclease III (rnc) 878660..879571 + 303 3323123 TP0810 - L COG0338 DNA adenine methyltransferase (dam) 879642..879767 - 41 3323128 TP0811 - - - T. pallidum predicted coding region TP0811 881178..882464 - 428 3323129 TP0813 - - - T. pallidum predicted coding region TP0813 882687..883610 + 307 3323124 TP0814 - O COG0492 thioredoxin reductase (trxB) 883732..884715 + 327 3323130 TP0815 - R COG3393 T. pallidum predicted coding region TP0815 884787..885452 - 221 3323131 TP0816 - - - T. pallidum predicted coding region TP0816 885590..886888 - 432 3323125 TP0817 - G COG0148 enolase (eno) 886885..887037 - 50 3323132 TP0818 - - - T. pallidum predicted coding region TP0818 887064..887996 - 310 3323126 TP0819 - R COG1234 conserved hypothetical protein 888024..888794 - 256 3323127 TP0820 - R COG0457 hypothetical protein 888890..889696 - 268 3323134 TP0821 - M COG1464 lipoprotein (tpn32) 889777..890682 - 301 3323135 TP0822 - M COG0668 conserved hypothetical protein 890770..891156 - 128 3323136 TP0823 - C COG2033 desulfoferrodoxin (rbo) 891553..893445 + 630 3323137 TP0824 - H COG1154 transketolase B (tktB) 893442..893627 + 61 3323144 TP0825 - - - T. pallidum predicted coding region TP0825 893614..894435 + 273 3323138 TP0826 - S COG1624 conserved hypothetical protein 894098..895375 + 425 3323145 TP0827 - - - T. pallidum predicted coding region TP0827 895372..895749 + 125 3323139 TP0828 - I COG0736 holo-acyl-carrier protein synthase (acpS) 895746..896630 + 294 3323140 TP0829 - S COG1655 conserved hypothetical protein 896627..897469 + 280 3323141 TP0830 - J COG0101 pseudouridylate synthase (hisT) 897479..899248 - 589 3323142 TP0831 - J COG0018 arginyl-tRNA synthetase (argS) 899271..900086 - 271 3323146 TP0832 - - - T. pallidum predicted coding region TP0832 900153..900875 + 240 3323147 TP0833 - - - T. pallidum predicted coding region TP0833 900932..902182 - 416 3323143 TP0834 - J COG0162 tyrosyl-tRNA synthetase (tyrS) 902269..905073 - 934 3323149 TP0835 - R COG0666 ankyrin, putative 905214..906038 - 274 3323154 TP0836 - - - T. pallidum predicted coding region TP0836 906186..907964 + 592 3323150 TP0837 - J COG0441 threonyl-tRNA synthetase (thrS) 908013..909677 - 554 3323151 TP0838 - R COG0488 ABC transporter, ATP-binding protein 909752..910759 - 335 3323155 TP0839 - - - T. pallidum predicted coding region TP0839 910864..913113 + 749 3323152 TP0840 - G COG0477 conserved hypothetical integral membrane protein 913175..914632 - 485 3323153 TP0841 - O COG0265 periplasmic serine protease DO (htrA-2) 914944..915711 - 255 3323157 TP0842 - J COG0024 methionine aminopeptidase (map) 915835..916659 - 274 3323158 TP0843 - O COG0484 heat shock protein, putative 916752..917804 + 350 3323159 TP0844 - G COG0057 glyceraldehyde 3-phosphate dehydrogenase (gap) 917859..918449 - 196 3323160 TP0845 - S COG1671 P23 protein, putative 918430..918756 - 108 3323166 TP0846 - - - T. pallidum predicted coding region TP0846 918756..919091 - 111 3323167 TP0847 - - - T. pallidum predicted coding region TP0847 919085..919453 - 122 3323161 TP0848 - J COG0292 ribosomal protein L20 (rplT) 919486..919686 - 66 3323162 TP0849 - J COG0291 ribosomal protein L35 (rpmI) 919739..920278 - 179 3323163 TP0850 - J COG0290 translation initiation factor 3 (infC) 920441..922615 + 724 3323168 TP0851 - - - T. pallidum predicted coding region TP0851 922644..923642 - 332 3323164 TP0852 - M COG0682 prolipoprotein diacylglyceryl transferase (lgt) 923793..924929 - 378 3323165 TP0853 - D COG0455 ATP-binding protein (ylxH-2) 924984..929585 - 1533 3323169 TP0854 - T COG2208 T. pallidum predicted coding region TP0854 929582..932965 - 1127 3323170 TP0855 - - - T. pallidum predicted coding region TP0855 933121..934098 + 325 3323176 TP0856 - - - T. pallidum predicted coding region TP0856 934101..934421 - 106 3323178 TP0857 - - - T. pallidum predicted coding region TP0857 934406..935632 + 408 3323177 TP0858 - - - T. pallidum predicted coding region TP0858 935714..936412 + 232 3323179 TP0859 - - - T. pallidum predicted coding region TP0859 936477..937199 + 240 3323180 TP0860 - - - T. pallidum predicted coding region TP0860 937274..939181 - 635 3323172 TP0861 - M COG0449 glucosamine-fructose-6-phosphate aminotransferase (glmS) 939418..940212 - 264 3323173 TP0862 - O COG0545 peptidyl-prolyl cis-trans isomerase, FKBP-type, 22 kDa (fklB) 940347..941630 + 427 3323174 TP0863 - E COG1104 nitrogen fixation protein (nifS-2) 941689..943329 - 546 3323175 TP0864 - M COG0739 conserved hypothetical protein 943363..944802 - 479 3323181 TP0865 - - - T. pallidum predicted coding region TP0865 946794..946979 - 61 3323193 TP0867 - - - T. pallidum predicted coding region TP0867 947148..948008 + 286 3323183 TP0868 - N COG1344 flagellar filament 34.5 kDa core protein (flaB1) 948023..948259 + 78 3323194 TP0869 - - - T. pallidum predicted coding region TP0869 948287..949144 + 285 3323184 TP0870 - N COG1344 flagellar filament 31 kDa core protein (flaB3) 949205..949366 - 53 3323195 TP0871 - - - T. pallidum predicted coding region TP0871 949442..951610 + 722 3323185 TP0872 - N COG1345 flagellar filament cap protein (fliD) 951622..952224 + 200 3323196 TP0873 - - - T. pallidum predicted coding region TP0873 952221..952496 + 91 3323186 TP0874 - - - conserved hypothetical protein 952536..952943 + 135 3323187 TP0875 - R COG0802 conserved hypothetical protein 952990..953655 + 221 3323188 TP0876 - O COG1214 conserved hypothetical protein 953660..954757 + 365 3323189 TP0877 - T COG2206 conserved hypothetical protein 954770..955720 - 316 3323197 TP0878 - - - T. pallidum predicted coding region TP0878 955726..957207 - 493 3323190 TP0879 - S COG3225 conserved hypothetical protein 957204..957929 - 241 3323191 TP0880 - R COG1277 membrane spanning protein, putative 957919..958725 - 268 3323192 TP0881 - Q COG1131 ABC transporter, ATP-binding protein (natA) 958804..960306 - 500 3323199 TP0882 - C COG1413 conserved hypothetical protein 960272..961369 - 365 3323200 TP0883 - R COG0795 conserved hypothetical integral membrane protein 961387..962475 - 362 3323201 TP0884 - R COG0795 conserved hypothetical integral membrane protein 962505..962945 - 146 3323202 TP0885 - F COG0756 deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) 962942..965050 - 702 3323203 TP0886 - J COG1185 polyribonucleotide nucleotidyltransferase (pnp) 965198..965467 - 89 3323204 TP0887 - J COG0184 ribosomal protein S15 (rpsO) 965483..966310 - 275 3323205 TP0888 - H COG0196 riboflavin kinase/FMN adenylyltransferase (ribF) 966314..967414 - 366 3323206 TP0889 - J COG0130 tRNA pseudouridine 55 synthase (truB) 967392..967772 - 126 3323207 TP0890 - J COG0858 ribosome-binding factor A (rbfA) 967769..970297 - 842 3323208 TP0891 - J COG0532 translation initiation factor 2 (infB) 970473..971930 - 485 3323210 TP0892 - K COG0195 N utilization substance protein A (nusA) 971980..972450 - 156 3323211 TP0893 - S COG0779 conserved hypothetical protein 972625..973647 - 340 3323212 TP0894 - S COG1432 conserved hypothetical protein 973654..974160 - 168 3323226 TP0895 - - - T. pallidum predicted coding region TP0895 974182..974334 - 50 3323227 TP0896 - - - T. pallidum predicted coding region TP0896 974316..975833 - 505 3323213 TP0897 - - - tpr protein K (tprK) 975830..979549 - 1239 3323214 TP0898 - L COG1074 ATP-dependent nuclease, subunit A, putative 979546..980133 - 195 3323228 TP0899 - L COG2887 T. pallidum predicted coding region TP0899 980112..982505 - 797 3323229 TP0900 - - - T. pallidum predicted coding region TP0900 982544..983956 - 470 3323215 TP0901 - Q COG0534 conserved hypothetical integral membrane protein 983997..984878 - 293 3323216 TP0902 - R COG1647 carboxylesterase (est) 984880..986478 + 532 3323217 TP0903 - M COG0771 UDP-N-acetylmuramoylalanine--D-glutamate ligase (murD) 986471..986722 + 83 3323230 TP0904 - - - T. pallidum predicted coding region TP0904 986685..987056 + 123 3323218 TP0905 - J COG0228 ribosomal protein S16 (rpsP) 987065..987307 + 80 3323219 TP0906 - R COG1837 conserved hypothetical protein 987370..987894 + 174 3323220 TP0907 - J COG0806 conserved hypothetical protein 987891..988643 + 250 3323221 TP0908 - J COG0336 tRNA (guanine-N1)-methyltransferase (trmD) 988615..988986 + 123 3323222 TP0909 - J COG0335 ribosomal protein L19 (rplS) 988983..989903 + 306 3323231 TP0910 - - - T. pallidum predicted coding region TP0910 989925..990176 + 83 3323223 TP0911 - S COG2257 conserved hypothetical protein 990189..991511 + 440 3323224 TP0912 - T COG2206 conserved hypothetical protein 991495..991875 + 126 3323225 TP0913 - L COG0792 conserved hypothetical protein 992047..992433 + 128 3323233 TP0914 - - - conserved hypothetical protein 992507..993841 + 444 3323234 TP0915 - R COG0457 conserved hypothetical protein 993898..994026 + 42 3323239 TP0916 - - - T. pallidum predicted coding region TP0916 994010..995359 + 449 3323235 TP0917 - P COG2239 Mg2+ transport protein (mgtE) 995374..996147 + 257 3323236 TP0918 - I COG0170 conserved hypothetical integral membrane protein 996173..996490 - 105 3323237 TP0919 - O COG0526 thioredoxin (trx) 996713..999142 + 809 3323240 TP0920 - R COG0457 T. pallidum predicted coding region TP0920 999250..1000587 + 445 3323238 TP0921 - R COG0446 NADH oxidase 1000721..1001614 - 297 3323241 TP0922 - - - T. pallidum predicted coding region TP0922 1001653..1002672 - 339 3323242 TP0923 - - - T. pallidum predicted coding region TP0923 1002996..1005332 + 778 3323244 TP0924 - R COG2183 tex protein (tex) 1005699..1006139 + 146 3323245 TP0925 - C COG0716 flavodoxin 1006290..1007828 - 512 3323246 TP0926 - N COG0681 signal peptidase I, putative 1007920..1008510 + 196 3323249 TP0927 - - - T. pallidum predicted coding region TP0927 1008605..1009345 + 246 3323250 TP0928 - - - T. pallidum predicted coding region TP0928 1009357..1010127 + 256 3323251 TP0929 - - - T. pallidum predicted coding region TP0929 1010151..1011872 + 573 3323252 TP0930 - - - T. pallidum predicted coding region TP0930 1011956..1013386 - 476 3323247 TP0931 - G COG1626 conserved hypothetical protein 1013396..1013488 - 30 3323253 TP0932 - - - T. pallidum predicted coding region TP0932 1013498..1015120 - 540 3323248 TP0933 - M COG0769 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (murE) 1015256..1016479 + 407 3323255 TP0934 - C COG1301 glutamate transporter, putative 1016472..1017410 - 312 3323256 TP0935 - I COG0657 N-acetylphosphinothricin-tripetide-deacetylase, putative 1017604..1018677 - 357 3323257 TP0936 - R COG1253 hemolysin, putative 1018849..1019484 - 211 3323258 TP0937 - R COG0622 conserved hypothetical protein 1019481..1020311 - 276 3323262 TP0938 - - - T. pallidum predicted coding region TP0938 1020376..1023930 - 1184 3323259 TP0939 - C COG1013 pyruvate oxidoreductase 1023946..1024086 - 46 3323263 TP0940 - - - T. pallidum predicted coding region TP0940 1024125..1024643 - 172 3323264 TP0941 - - - T. pallidum predicted coding region TP0941 1024720..1025184 - 154 3323265 TP0942 - - - T. pallidum predicted coding region TP0942 1025190..1025636 - 148 3323260 TP0943 - N COG1516 flagellar protein (fliS) 1025685..1026857 - 390 3323261 TP0944 - - - conserved hypothetical protein 1027028..1027684 - 218 3323267 TP0945 - G COG0036 ribulose-phosphate 3-epimerase (cfxE) 1027836..1028504 + 222 3323268 TP0946 - M COG0357 glucose-inhibited division protein B (gidB) 1028549..1029196 - 215 3323269 TP0947 - O COG0652 peptidyl-prolyl cis-trans isomerase, cyclophilin-binding (cyp) 1029193..1029888 - 231 3323270 TP0948 - R COG1847 spoIIIJ-associated protein (jag) 1029904..1031901 - 665 3323271 TP0949 - N COG0706 membrane protein 1032177..1032461 - 94 3323277 TP0950 - J COG0594 T. pallidum predicted coding region TP0950 1032465..1032620 - 51 3323275 TP0951 - J COG0230 ribosomal protein L34 (rpmH) 1032740..1033777 - 345 3323272 TP0952 - - - lipase, putative 1033859..1035049 - 396 3323273 TP0953 - S COG1916 pheromone shutdown protein (traB) 1035136..1036572 - 478 3323274 TP0954 - R COG0457 conserved hypothetical protein 1036644..1036916 - 90 3323276 TP0955 - - - T. pallidum predicted coding region TP0955 1037012..1037983 + 323 3323288 TP0956 - - - T. pallidum predicted coding region TP0956 1038074..1039102 + 342 3323279 TP0957 - - - Tp33 protein 1039134..1041032 + 632 3323280 TP0958 - S COG1593 dicarboxylate transporter (dctM) 1041101..1041490 - 129 3323289 TP0959 - - - T. pallidum predicted coding region TP0959 1041502..1042296 - 264 3323281 TP0960 - N COG1749 flagellar basal-body rod protein (flgG-1) 1042372..1043187 - 271 3323282 TP0961 - N COG1749 flagellar basal-body rod protein (flgG-2) 1043273..1044505 - 410 3323283 TP0962 - R COG0577 conserved hypothetical integral membrane protein 1044616..1045845 - 409 3323284 TP0963 - R COG0577 conserved hypothetical integral membrane protein 1045835..1046542 - 235 3323285 TP0964 - R COG1136 ABC transporter, ATP-binding protein 1046542..1047504 - 320 3323286 TP0965 - Q COG0845 membrane fusion protein, putative 1047529..1049163 - 544 3323290 TP0966 - - - T. pallidum predicted coding region TP0966 1049210..1050763 - 517 3323291 TP0967 - - - T. pallidum predicted coding region TP0967 1050760..1052382 - 540 3323292 TP0968 - - - T. pallidum predicted coding region TP0968 1052379..1053998 - 539 3323293 TP0969 - - - T. pallidum predicted coding region TP0969 1053995..1054111 - 38 3323294 TP0970 - - - T. pallidum predicted coding region TP0970 1054133..1054747 - 204 3323287 TP0971 - S COG3470 membrane antigen, pathogen-specific (tpd) 1054903..1056249 - 448 3323296 TP0972 - P COG0672 conserved hypothetical integral membrane protein 1056337..1057998 + 553 3323297 TP0973 - J COG0016 phenylalanyl-tRNA synthetase alpha subunit (pheS) 1058050..1058331 - 93 3323306 TP0974 - - - T. pallidum predicted coding region TP0974 1058383..1059207 - 274 3323298 TP0975 - R COG0313 conserved hypothetical protein 1059255..1060634 + 459 3323307 TP0976 - - - T. pallidum predicted coding region TP0976 1060621..1061481 + 286 3323299 TP0977 - S COG0327 conserved hypothetical protein 1061478..1062071 + 197 3323300 TP0978 - N COG0597 signal peptidase II (lsp) 1062241..1063014 + 257 3323301 TP0979 - L COG0084 conserved hypothetical protein 1063022..1064044 + 340 3323302 TP0980 - R COG0042 histidine phosphokinase/phophatase (ntrB) 1064104..1065267 + 387 3323303 TP0981 - T COG2199 sensory transduction histidine kinase, putative 1065283..1065909 + 208 3323304 TP0982 - R COG0705 glpG protein, putative 1065899..1066615 + 238 3323308 TP0983 - - - T. pallidum predicted coding region TP0983 1066639..1068558 - 639 3323305 TP0984 - O COG0326 heat shock protein 90 (htpG) 1068702..1070510 + 602 3323310 TP0985 - J COG0173 aspartyl-tRNA synthetase (aspS) 1070566..1071450 + 294 3323311 TP0986 - G COG0697 conserved hypothetical integral membrane protein 1071496..1071666 - 56 3323318 TP0987 - - - T. pallidum predicted coding region TP0987 1071733..1072569 + 278 3323312 TP0988 - S COG2095 conserved hypothetical integral membrane protein 1072605..1073477 - 290 3323313 TP0989 - - - P26 1073524..1076625 + 1033 3323314 TP0990 - R COG0457 conserved hypothetical protein 1076689..1076847 + 52 3323315 TP0991 - C COG1773 rubredoxin 1076880..1077167 + 95 3323316 TP0992 - - - conserved hypothetical protein 1077304..1078260 - 318 3323317 TP0993 - M COG0797 rare lipoprotein A, putative 1078616..1079425 + 269 3323320 TP0994 - L COG0084 conserved hypothetical protein 1079501..1080787 + 428 3323321 TP0995 - T COG0664 cyclic nucleotide binding protein 1080870..1082486 - 538 3323322 TP0996 - - - conserved hypothetical protein 1082643..1084439 - 598 3323323 TP0997 - N COG0616 protease IV (sppA) 1084473..1085975 - 500 3323324 TP0998 - E COG1115 sodium/proton-dependent alanine transporter 1086047..1088446 + 799 3323325 TP0999 - D COG1674 cell division protein, putative 1088624..1089295 + 223 3323333 TP1000 - - - T. pallidum predicted coding region TP1000 1089435..1090616 - 393 3323334 TP1001 - - - T. pallidum predicted coding region TP1001 1090630..1091298 - 222 3323327 TP1002 - - - conserved hypothetical protein 1091493..1092530 + 345 3323335 TP1003 - - - T. pallidum predicted coding region TP1003 1092553..1093158 - 201 3323328 TP1004 - L COG0353 recombination protein (recR) 1093232..1094950 - 572 3323329 TP1005 - L COG2812 DNA polymerase III, subunits gamma and tau (dnaH) 1095009..1096922 - 637 3323330 TP1006 - L COG0187 DNA gyrase, subunit B (gyrB) 1097031..1097948 - 305 3323331 TP1007 - F COG1351 thymidylate synthase-complementing protein (thy1) 1097991..1100528 - 845 3323332 TP1008 - F COG0209 ribonucleoside-diphosphate reductase, subunit alpha (nrdA) 1100655..1101725 - 356 3323337 TP1009 - C COG0240 glycerol-3-phosphate dehydrogenase (gpsA) 1101822..1102271 - 149 3323338 TP1010 - F COG0105 nucleoside-diphosphate kinase (ndk) 1102397..1103005 - 202 3323339 TP1011 - J COG0193 peptidyl-tRNA hydrolase (pth) 1103040..1103975 - 311 3323340 TP1012 - K COG0568 RNA polymerase sigma-43 factor (sigA) 1104180..1104446 + 88 3323341 TP1013 - O COG0234 chaperonin (groES) 1104457..1106391 - 644 3323349 TP1014 - - - T. pallidum predicted coding region TP1014 1106357..1106782 - 141 3323342 TP1015 - K COG0781 N utilization substance protein B (nusB) 1106779..1107864 - 361 3323343 TP1016 - O COG0760 basic membrane protein (tpn39b) 1107937..1109754 - 605 3323345 TP1017 - J COG0013 alanyl-tRNA synthetase (alaS) 1109926..1111440 + 504 3323344 TP1018 - R COG1418 conserved hypothetical protein 1111462..1111905 + 147 3323346 TP1019 - J COG0721 glu-tRNA amidotransferase, subunit C (gatC) 1111906..1113426 + 506 3323347 TP1020 - J COG0154 glu-tRNA amidotransferase, subunit A (gatA) 1113419..1114948 + 509 3323348 TP1021 - J COG0064 glu-tRNA amidotransferase, subunit B (gatB) 1115044..1116411 - 455 3323351 TP1022 - O COG1066 DNA repair protein (sms) 1116458..1116952 - 164 3323352 TP1023 - R COG2137 recX protein (recX) 1117080..1117469 - 129 3323359 TP1024 - J COG0103 ribosomal protein S9 (rpsI) 1117485..1117913 - 142 3323353 TP1025 - J COG0102 ribosomal protein L13 (rplM) 1118346..1120115 + 589 3323354 TP1026 - E COG1164 oligoendopeptidase F, putative 1120237..1121013 + 258 3323355 TP1027 - F COG2820 uridine phosphorylase (udp) 1121029..1123041 - 670 3323356 TP1028 - L COG0210 DNA helicase II (uvrD) 1123124..1123810 - 228 3323360 TP1029 - - - T. pallidum predicted coding region TP1029 1123829..1124326 - 165 3323361 TP1030 - - - T. pallidum predicted coding region TP1030 1124354..1125898 + 514 3323357 TP1031 - - - tpr protein L (tprL) 1125966..1126400 - 144 3323362 TP1032 - - - T. pallidum predicted coding region TP1032 1126412..1127347 - 311 3323358 TP1033 - R COG1752 conserved hypothetical protein 1127421..1128446 + 341 3323364 TP1034 - P COG0530 conserved hypothetical integral membrane protein 1128443..1131313 - 956 3323365 TP1035 - J COG0525 valyl-tRNA synthetase (valS) 1131466..1133844 + 792 3323366 TP1036 - P COG2217 cation-transporting ATPase, P-type 1133934..1134650 - 238 3323367 TP1037 - R COG1272 hemolysin III (hlyIII) 1134809..1135342 - 177 3323368 TP1038 - L COG0783 bacterioferrin (TpF1) 1135569..1136141 + 190 3323369 TP1039 - F COG0503 adenine phosphoribosyltransferase (apt) 1136164..1137219 - 351 3323370 TP1040 - J COG2269 lysyl-tRNA synthetase (lysS-2) 1137219..1137932 - 237 3323371 TP1041 - N COG0740 ATP-dependent Clp protease proteolytic component (clpP-2)